Thermomonas sp. HDW16: G7079_12090
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Entry
G7079_12090 CDS
T06498
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
theh
Thermomonas sp. HDW16
Pathway
theh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
theh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G7079_12090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
theh02022
]
G7079_12090
02035 Bacterial motility proteins [BR:
theh02035
]
G7079_12090
Two-component system [BR:
theh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
G7079_12090
Bacterial motility proteins [BR:
theh02035
]
Pilus system
Twitching motility proteins
G7079_12090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_50
FleQ
VpsR
Motif
Other DBs
NCBI-ProteinID:
QIL21414
LinkDB
All DBs
Position
2546572..2547975
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AA seq
467 aa
AA seq
DB search
MTAPARSTQASALIVDDERDIRELLVLTLGRMGLRCDTASSLTDARAMLRQNRYALCLTD
MRLADGSGVDLVREIAQLYAETPVAMITAFGNQDAAVGALKAGAFDFVSKPVDLSVLRGL
VQHALKLGSDSRKSPTTAPDPAAPRLLGASPAMDDLRTTLSKVARSQAPVYIAGESGVGK
ELVARTIHAEGARTAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAEGG
TLFLDEVAELPLPMQVKLLRAIQEKSVRPVGANAEIAVDVRILSATHKNLSALVDEGRFR
HDLYYRINVIELRVPPLRERREDLPLLADAVLARLATAQHRVKPQLHADAVEALARYNFP
GNVRELENILERAFALADDDGIRAADLRLPEMRPSIPAQAAAAQLDPSLIDPRESATSAL
PSFIEEIERKAIEQALTDNRYNKTKAAAQLGITFRALRYKLKKLGIE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacagcccctgcccgcagcacccaggccagcgccctgatcgtcgatgacgagcgcgac
attcgcgaactgctggtgctgaccctggggcgaatgggactgcgctgcgacaccgcctcc
tcactcaccgatgcccgtgccatgctgcggcagaaccgctatgcgctatgcctgaccgac
atgcgcctggccgatggttccggcgtggatctggtgcgtgaaatcgcccagctgtatgcg
gaaaccccggtggcgatgatcaccgcgttcggcaaccaggatgccgcggtcggcgcgctc
aaggctggcgccttcgatttcgtcagcaaaccggtggatctcagcgtgctgcggggtctg
gtacagcatgctttgaagctgggcagcgactcgcgcaaatcgccgacaacggccccggat
cccgccgcaccccgcctgctcggggcttcgccggccatggatgatctgcgcaccaccctc
tccaaggtcgcgcgcagccaggcgccggtctacatcgccggcgaatccggcgtgggcaag
gagctggtcgcgcgcaccatccatgcagagggcgcgcgcaccgcaggcccgttcgtaccg
gtcaattgcggcgcaattccggccgaattgatggaaagcgagttcttcggccacaagaag
ggcagcttcaccggcgcccacgcggacaagccaggcctgttccaggcggcggagggcggc
accctgttcctggacgaagtggccgagctgccactgccgatgcaggtcaagctgctgcgc
gcgatccaggaaaaatccgtgcgcccagtgggcgccaatgccgaaatcgcggtggacgta
cgcatcctgtccgccacccacaagaacctgagcgcgctggtcgatgagggccgctttcgc
catgacctgtactaccgcatcaacgtgatcgagctgcgggtgccgccgctgcgcgaacgc
cgcgaagacctgccgttgctcgccgatgctgtgctggcccgccttgccaccgcccagcat
cgggtcaagccgcaactgcatgcggatgccgtggaagcgctggcccgctacaacttcccc
ggcaacgtgcgtgagctggagaacatcctggagcgcgccttcgccctggccgatgacgac
ggcatccgtgccgccgacctacgcctgccggagatgcggcccagcattcccgcccaggcc
gcggccgcgcaactggacccaagcctgatcgacccacgcgaatccgccaccagcgccctg
cccagtttcatcgaggaaatcgaacgcaaggcgatcgagcaggccctgaccgacaaccgc
tacaacaagaccaaggccgccgcgcagctgggcatcaccttccgcgcgctgcgctacaag
ctgaagaagctggggatcgaataa
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