Thermococcus argininiproducens: K1720_03570
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Entry
K1720_03570 CDS
T08316
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
thei
Thermococcus argininiproducens
Brite
KEGG Orthology (KO) [BR:
thei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thei03016
]
K1720_03570 (endA)
Enzymes [BR:
thei01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
K1720_03570 (endA)
Transfer RNA biogenesis [BR:
thei03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
K1720_03570 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
USH00542
UniProt:
A0A9E7MAM5
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All DBs
Position
680688..681200
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AA seq
170 aa
AA seq
DB search
MSEFKFYISGERVFSTMESAINKLYNKRHYGEVISGKLFLSFIEAAYLLEKEWIRVFEGE
KELGLEELFEKGRKKDEQFDLKFLVYKDLRDRGYTVKTALKYGSHFRVYRKGMEEHADWL
IWVVSESQKMHPNDLIARVRVAHGVRKKMVLAVVDEDNDVVYYQVERVKF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagttcaaattttatatcagtggagagagggttttcagtaccatggaaagtgcg
ataaataaactttataacaagagacattacggagaggttatcagtggaaagttatttctc
tcatttattgaagctgcctatctccttgaaaaagagtggattagggtttttgagggtgaa
aaggaactaggtcttgaagaactttttgaaaaaggtagaaagaaagatgaacagtttgac
ttaaaattcttggtatacaaggatcttagagacaggggatacactgtcaagactgctctt
aaatatggctctcattttagagtatataggaagggtatggaagagcatgccgactggctt
atctgggttgtaagtgagagtcaaaaaatgcatccaaatgacttgattgcaagggttagg
gtggcccatggagtgaggaaaaagatggttcttgcagttgttgatgaggataatgatgtt
gtttattatcaagttgaaagagtaaagttttga
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