Thermococcus argininiproducens: K1720_05595
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Entry
K1720_05595 CDS
T08316
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
thei
Thermococcus argininiproducens
Pathway
thei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1720_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thei03019
]
K1720_05595
Messenger RNA biogenesis [BR:
thei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
K1720_05595
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
K1720_05595
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1
Auto_anti-p27
HVO_2753_ZBP
RRP4_S1
OB_RRP5_4th
Prok-RING_1
Zn_ribbon_IS1595
Trm112p
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
USG99027
UniProt:
A0A9E7M8S8
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Position
1055379..1055978
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AA seq
199 aa
AA seq
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MDEGKKKIIKNGDIVLPGDYLGVIEEFLPGEGIIEENGELYAARAGRVKIDLEKIEISVD
PITDTPPLPQVGDTVIARVIEVKPQAAIVQLLKIEGRKGYREIATSKLAGIHISQVREGY
VESMNNEFKIGDIVRAKVLTNEKSPIQLTTKELDLGVIYALCSSCRIPLVRRGNVLVCPK
CGRTEARKLSAYYRKLKLE
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggaaaaaagaagataataaaaaatggggatatagttcttcctggggattat
cttggggttattgaggaatttctcccaggcgaggggataatcgaggaaaatggcgagctt
tatgctgccagagccggtagagttaaaattgatctcgaaaaaattgagatttcagtagac
cctatcactgacactccgccacttccgcaggtgggtgacactgtcatagcaagagtgatt
gaagtaaagccacaggctgcgatagtccagctgcttaaaattgaagggagaaagggttat
agagagatagcaacttcaaagttggctggtatccatatttctcaagttagggagggatat
gtggaatccatgaataatgagttcaaaatcggtgatatagttagagcaaaggttttaacc
aatgaaaaaagcccgatacagcttacaacaaaagagttggatttaggtgtgatttacgca
ttatgttcttcatgtagaatacctttagtaagaagaggtaatgtgttggtgtgtcctaaa
tgtgggagaactgaagctagaaagttatctgcgtattatagaaaactgaagttggagtaa
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