Thermococcus argininiproducens: K1720_09850
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Entry
K1720_09850 CDS
T08316
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
thei
Thermococcus argininiproducens
Pathway
thei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1720_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thei03019
]
K1720_09850
Messenger RNA biogenesis [BR:
thei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
K1720_09850
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
K1720_09850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
USG99779
UniProt:
A0A9E7MA95
LinkDB
All DBs
Position
complement(1815397..1816140)
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AA seq
247 aa
AA seq
DB search
MMGKPEGLKLIDENGYRIDGRKKYELRKIKMEVGVLKSADGSAYVEWGKNKVMAAVYGPR
EIHPKHLQKPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPAVILELFPR
TSIDIFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIDGEIVLDLNKEED
NYGEADVPVAIMPIKNDITLLQMDGYLTKDEFLEAVRLAIKGAKAVYQKQREALKEKYLK
IAQEVGE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaaaaccggaagggcttaagcttattgatgagaatggatacagaattgatgga
aggaaaaagtatgaacttaggaaaataaaaatggaagttggagtccttaaaagtgcggat
ggttctgcctatgttgagtggggaaagaataaagtaatggctgctgtttatgggccaaga
gagattcatccaaaacatcttcaaaaaccggatagagctattctgagggtaagatataac
atggcaccatttagtgttgaagagagaaaaaagccgggaccagataggagaagtgtggag
ataagtaaagtcataagaggtgccctagaaccagcagttattctcgagcttttcccaaga
acatcaatagatatctttatagaagttcttcaggccgatgctggaactagggtggcaggg
attacagcagcttcgcttgcattggctgatgcaggaattccaatgagagatcttgttgca
gcatgcgctgcgggaaagatcgatggtgagatagtactggatctcaacaaggaagaggac
aattatggagaagctgatgtgccagtggcgataatgccaataaagaatgacataactcta
cttcaaatggatggttatctaacaaaagatgaattccttgaagccgtgagacttgcaata
aaaggcgcgaaagcagtttatcagaaacaaagagaggccctaaaggaaaagtatctcaaa
atagcacaagaggtaggtgagtga
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