Infirmifilum lucidum: IG193_04365
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Entry
IG193_04365 CDS
T06910
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
thel
Infirmifilum lucidum
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thel03016
]
IG193_04365 (truD)
Enzymes [BR:
thel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
IG193_04365 (truD)
Transfer RNA biogenesis [BR:
thel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IG193_04365 (truD)
Prokaryotic type
IG193_04365 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QOJ79694
UniProt:
A0A7L9FL60
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Position
786163..787479
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AA seq
438 aa
AA seq
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MELDKILEMRYYGLSGDGIGGYIRRMFEDFIVYEISIDGTLATPNCREIPQGAGEYTWVV
VEKRGVDSVTAVRKIRKFLGLQGTDIDIAGLKDTTAVTFQFASIKGEVPAEAIEKFNSLN
TRVKIHCPVRRPFHLRPGLLFGNRFTIRVRDCNTSRLHELLDELRRLGGVPNYFGYQRFG
SIRPVTHVVGKRIIEGRFKEAVEELLLRIFPHESQRAKNAREYLASTGDFRGTLEIFPKT
MKSERAIIAYLAERPRDYVGALRHVSGYIRKLFVGAYQAYLFNKVLSKRIERGLSWVYAS
PGDYVGVAPGSAGSGHMPVLMANDTNLDKVNKLIHDGRAFLLLPIFGYNTHLSQGEEGEI
EKEVLREENIDVRSFYVKSLPEASSAGSYRPSNLSPLDLDVKVDSEGVVFSFALKKGMYA
TTLLREIVKPSHPVEQGF
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtggagctggataaaatcttggagatgaggtactacggtttgagcggagacggcatagga
gggtatattagacgcatgtttgaggactttatagtatacgagataagcatagatgggact
cttgccaccccgaattgccgcgaaatacctcaaggcgcgggagaatacacgtgggttgta
gttgagaagagaggcgttgattccgtgacagctgtgaggaagatccggaagttcctaggt
cttcaggggacagatatcgatattgccggtttgaaggacaccactgcggttacatttcaa
tttgcgtcaataaaaggcgaagtcccagcagaagccatagagaagtttaactccttgaac
acacgcgtgaaaatacactgcccagtgaggagaccattccatttgagacccggactcctc
ttcggcaatcgcttcaccataagagttagggactgtaacaccagccgcctacacgagttg
ctggacgaactcaggaggctgggtggtgtcccgaattacttcgggtaccagaggtttggg
agtatccgcccagtaactcatgtagtcggtaagcgtatcatagagggcaggtttaaagag
gcagtggaagaactcttattgagaattttcccccatgaatcacaaagggcaaaaaatgct
agagaatatctagcttcaacgggcgatttcaggggaacgctggaaatttttcccaaaact
atgaagagcgagcgcgcaataatcgcttatctagctgaaaggcctagagattatgtaggt
gctcttcgtcacgtatcggggtatataaggaagctctttgttggagcatatcaggcgtat
ttgttcaacaaggtgctcagcaaaaggatcgagcgggggctttcctgggtctatgcttct
ccaggagactacgtaggtgttgctcctggatcagcaggctctggacatatgccagtgctc
atggcaaacgacaccaacctagataaggtcaacaaacttattcacgatgggagggctttc
ctattacttcccattttcggctataacacacacctttcgcaaggagaagagggcgaaatc
gagaaagaagtcctgagggaggaaaacatagatgttcgtagcttctatgtgaagagcctc
ccagaggcctcatcagctgggagttaccgcccttcaaacctctcgcctctggacttagac
gttaaagtagactctgaaggcgttgtattctcattcgctctcaaaaaggggatgtatgca
acgacgcttctacgcgagattgtaaaaccgtcccaccctgtggagcaggggttttag
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