Infirmifilum lucidum: IG193_04445
Help
Entry
IG193_04445 CDS
T06910
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
thel
Infirmifilum lucidum
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thel03016
]
IG193_04445 (endA)
Enzymes [BR:
thel01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
IG193_04445 (endA)
Transfer RNA biogenesis [BR:
thel03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
IG193_04445 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Rrp40_N
Motif
Other DBs
NCBI-ProteinID:
QOJ79709
UniProt:
A0A7L9FIV9
LinkDB
All DBs
Position
complement(803686..804309)
Genome browser
AA seq
207 aa
AA seq
DB search
MRGTLFLSNFIHKNPLCRVIRVEQCEKIRGVLLGGRVVIFDREKANALYFRGGFFGRFFT
VPKPKTPDVKKELELSLFDAVYLAERGCLEVLNESGEAVSIDALKQLARRVYENFDDAYA
VYKDLRGRGYVVKSGMKFGSTFAVYKLGPGIDHAPFLVHVLNYDSKLDPLEIIRAGRLSH
SVKKKFILAYRDPIDGKIRYFVFKWFM
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcacgttatttttaagtaattttattcataaaaatcctttgtgcagggtgatt
cgcgtggagcagtgtgagaagattaggggcgtgctcctcggggggcgcgtagttattttt
gaccgcgagaaggcaaatgccctatattttagaggagggttcttcgggcgtttttttact
gtcccgaagccaaagactcctgatgtaaagaaggaactcgagctctcactgttcgacgct
gtatacctggcagagcgtgggtgcctggaggttttaaatgaaagtggtgaagcagtaagt
atagacgctcttaaacagcttgccagaagggtttatgagaattttgacgacgcatatgct
gtctacaaggatctgagaggccggggctatgtagtcaagtctggcatgaagttcggctcg
acttttgccgtctacaagctcgggcctgggattgaccatgccccgttcttggtacatgtt
ctcaactatgacagtaaactggatcccctagagatcatccgggcaggcaggctctcccac
tctgtgaagaagaagtttatactggcctatagagatccgatagacggcaaaataagatac
tttgtttttaagtggttcatgtag
DBGET
integrated database retrieval system
