Infirmifilum lucidum: IG193_04940
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Entry
IG193_04940 CDS
T06910
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
thel
Infirmifilum lucidum
Pathway
thel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IG193_04940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thel03019
]
IG193_04940
Messenger RNA biogenesis [BR:
thel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
IG193_04940
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
IG193_04940
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QOJ78137
UniProt:
A0A7L9FEM1
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All DBs
Position
885844..886590
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AA seq
248 aa
AA seq
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MTKARAPVKLLDENGRRVDGRLPDEMRRLRIEAGVLRNADGSAYVELGNNKVISAVYGPR
EATPRHEALSDRALLRCKYTMLPFSVADRKSPQPSRREIELSKVIREALAPAIFLNEYPR
TAIDVFINILEADGGTRTASIIAASVALADAGIAMRDLVAAIAVGKIGNVLVLDINGLED
QYGDGDMPIAMMPKLGEITLIQADGIYTPQEIEQAISMASKAIRRIYEEQVRALRSKYEA
VRQEVDEE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagctagagcaccagtaaaattactcgatgagaatggcaggagggtagatgga
cgtctgcctgacgagatgcgccggttgaggatagaagcaggggttctcagaaacgctgac
gggtcagcttacgtagaactaggcaacaacaaggttatatctgcagtttacggcccccgt
gaggccacacccaggcatgaagctctaagcgacagggcacttctgcgctgtaagtatact
atgttgcccttcagtgttgctgacaggaagagcccacaaccctcgcgcagggagatagaa
ctctcgaaggttatacgcgaggctctagcaccagcaatattcctcaacgagtacccgaga
acggctattgacgtcttcataaacatactggaggctgacgggggcactagaactgcaagc
attatagctgcctcagtagctctagcagatgccgggatagccatgcgtgacctcgttgcc
gcaatagctgttgggaaaattggtaatgttctcgtactggatatcaacggtctagaagac
cagtacggcgatggcgacatgcctattgccatgatgccgaagctcggggaaataacgcta
atacaggccgatggtatatataccccacaggagatagagcaggcaatatctatggcttcg
aaagctatcaggaggatttacgaggaacaagttagagctctaaggagtaaatatgaagct
gttagacaggaggtagatgaagaatga
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