Infirmifilum lucidum: IG193_05700
Help
Entry
IG193_05700 CDS
T06910
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
thel
Infirmifilum lucidum
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thel03016
]
IG193_05700 (thpR)
Enzymes [BR:
thel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IG193_05700 (thpR)
Transfer RNA biogenesis [BR:
thel03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IG193_05700 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QOJ78264
UniProt:
A0A7L9FH43
LinkDB
All DBs
Position
1009858..1010424
Genome browser
AA seq
188 aa
AA seq
DB search
MSERILRVFVAVKVDRPEVVAKIKVFQEELERAGLKAKFVEAENLHITLQFIGEIPQEKV
QSIKVKLREVRASPFVMELEGVGAFPSLKNPRVVWIGVKRGAEELSQLAHKVSQAILATG
VRVEREEFIPHLTIARVKAPLNGEARRIIEGNSATLFGEQDVTRFYLVKSTLTPRGSIYT
DLAVYQLT
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcgcatactgagggtctttgtagccgtaaaggtagacaggcctgaagtagta
gcgaagattaaggttttccaggaggaactagaaagggctggattaaaggctaagttcgta
gaggccgaaaacctgcacataaccttacaattcataggagaaataccacaggagaaggtt
caaagcattaaggttaaactgcgtgaagtgagggctagcccattcgtgatggagctagag
ggtgttggggcttttccaagcctcaagaatcctagggttgtctggatcggcgtgaagagg
ggtgcagaggagctgtctcagctcgcccacaaagtctcccaggctatactcgcgacagga
gttagagttgagcgagaagagtttataccgcatctaacaattgcgcgggtaaaagccccg
cttaacggcgaagccaggagaataattgaagggaattccgcgacactgttcggcgagcag
gatgtgacgagattctacctagtaaagagcactctcacgccccgaggatctatatacaca
gatcttgccgtgtaccagttaacatag
DBGET
integrated database retrieval system
