Infirmifilum lucidum: IG193_06040
Help
Entry
IG193_06040 CDS
T06910
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
thel
Infirmifilum lucidum
Pathway
thel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
IG193_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thel03019
]
IG193_06040
03009 Ribosome biogenesis [BR:
thel03009
]
IG193_06040
04131 Membrane trafficking [BR:
thel04131
]
IG193_06040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thel04147
]
IG193_06040
Messenger RNA biogenesis [BR:
thel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
IG193_06040
Ribosome biogenesis [BR:
thel03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
IG193_06040
Membrane trafficking [BR:
thel04131
]
SNARE
SNARE associated proteins
Others
IG193_06040
Autophagy
Aggrephagy
Other aggrephagy associated proteins
IG193_06040
Exosome [BR:
thel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IG193_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_22
AAA_2
AAA_5
AAA_14
AAA_33
AAA_lid_PRS2_C
AAA_28
RNA_helicase
AAA_25
AAA_24
IstB_IS21
Mg_chelatase
AAA_18
nSTAND3
NPHP3_N
Parvo_NS1
Sigma54_activat
ATPase_2
Vps4_C
AAA_7
DUF815
ABC_tran
AAA_17
Zeta_toxin
AAA_3
ATPase
TsaE
NB-ARC
PhoH
SLFN-g3_helicase
Molydop_binding
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
QOJ78325
UniProt:
A0A7L9FHS9
LinkDB
All DBs
Position
1074892..1077090
Genome browser
AA seq
732 aa
AA seq
DB search
MSSEEKPNEIELKVYEVRQHEAGRGRVRIDEDAMEALGISAGDVVEIEGKRKTVAIAWPG
YAEDKGKGIIRMDGWTRKNAGVSIGDRVKVRKAEVKPALTVRLAPVSMTLAVDENFVAYV
KKRLLDRPIIEGDIIQIPVLGQVIHFNVVSIKPKGVVVVTEKTQLKILERPVDVGRIPRV
TYDDIGDLEEAKQKIREMVELPLKHPELFKRLGIDPPKGILLYGPPGTGKTLLAKAVANE
TDAYFIAINGPEIMSKFYGESEQRLREIFEEAKEHAPAIIFIDEIDAIAPKREEVTGEVE
KRVVAQLLALMDGLEARGDVIVIGATNRPNALDPALRRPGRFDREIEIGIPDKRGRLEIL
KVHTRSMPLAKNVDLEKLAEMTHGYVGADLAALCREAAMKALRRVLPRIDLEKEEIPLEV
LETIEVEMEDFLNAYREITPSALREIEVEVPSVRWDDIGGLEDVKQQLREAVEWPLKYPE
SFGRLGIDPPKGILLYGPPGTGKTLLAKAVATESEANFVSIKGPEIFSKWVGESERAIRE
LFRKARQVAPSVIFIDEIDALAPMRGLVSSDSGVTERVVSQLLTEMDGLERLEGVVVVAA
TNRPDIIDPALLRPGRFDRLIYVPPPDEKARLEIFRVHTRRMPLAEDVDLAELARRTEGY
TGADIEVLVREAGLIALREDVNTTKVYMRHFEEALKKVRPSLTPDIIKFYESWNERARRV
SKQQLTVTGFYV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagcgaggagaagccaaacgagattgagttgaaagtctacgaagtccgccaacac
gaggcggggaggggcagagttaggatagatgaagacgccatggaggctctgggcataagt
gctggcgacgtagtggagatcgagggtaagaggaagactgttgctattgcatggccaggc
tatgctgaagacaaggggaagggtattattcgcatggatggatggactaggaagaacgcc
ggtgtgagcataggggacagggtgaaagtcagaaaagccgaagtaaaacctgctctgacg
gttaggttagcgccagtgtcaatgacattagctgttgacgaaaactttgtcgcgtacgtc
aagaagaggctcctagacaggcctatcatagagggggacatcatacagattcctgtactt
gggcaggtgattcacttcaacgttgtcagcataaagccaaaaggcgttgtggtggttact
gagaagacgcagctcaagatccttgaaaggccagtagacgttggcaggatacctcgagta
acctacgacgacataggcgaccttgaggaggcaaagcagaagatcagggagatggtagag
ctcccactcaagcaccccgagctcttcaagaggcttggcatagacccgcctaagggcatc
ttgctctacggccctccgggtactggcaagactctgctcgccaaggctgtcgccaacgag
accgatgcctacttcattgccataaatggccctgagataatgagcaagttctacggcgag
agcgagcagaggctccgcgagatattcgaggaagcaaaggagcacgccccggccatcata
ttcatcgacgagatagacgccatagccccgaagagggaggaagtcacaggcgaagtcgag
aagagagtagtagcacagctcctagcactaatggacggcttagaggccaggggggatgta
attgttatcggcgccacaaacaggcccaacgcgcttgaccctgctctaaggcgtcctggg
agattcgacagggaaattgagatcgggatacctgacaagcgcgggaggcttgagattctc
aaggttcacacccgcagtatgccgctcgctaagaacgttgacctcgagaagcttgcagaa
atgactcatggctacgttggggcagaccttgcagctctatgccgagaggcggctatgaag
gctttgcgaagagtcttgcctaggatagacctggagaaggaagagataccgctagaggtt
ctagagacaatcgaggttgagatggaagacttcctcaacgcctacagggagattaccccg
agcgctttaagggagatagaagtcgaagtacctagtgtgaggtgggacgacataggtggg
cttgaggacgttaagcagcagctgcgcgaggccgtcgagtggcctcttaaatacccagag
tcttttgggaggcttggcatagacccgcctaagggcatcttgctctacggccctccgggt
actggcaagactctgctcgccaaggctgttgccacggagagcgaggcaaactttgttagc
ataaaagggcctgagatcttcagcaagtgggtcggcgagagcgagagagcgataagagag
ctctttagaaaggcaaggcaggtggctccaagcgttatatttatcgatgagatagatgcc
ctggcaccaatgagaggccttgtttcatcagattctggagtgacagaacgcgtcgtcagc
cagcttttaactgagatggatggccttgagaggcttgagggtgttgtcgttgttgctgct
acgaacaggccggacataatcgaccccgcgctcctcaggcccgggaggttcgacaggctc
atctacgtcccgccacccgacgagaaggccaggctcgagatattcagagtgcacacgagg
aggatgccgctagcagaagacgtagacctagcagaactagcgaggaggacagaaggatac
acgggagcagacattgaagtcttggtgcgcgaagctgggcttatagctctgagggaggac
gtcaatactacgaaggtctacatgagacacttcgaggaagctttaaagaaggttcgtccg
tctcttacgccagacatcataaagttctacgagtcctggaacgagagggcgaggagggtt
tcgaaacagcaactaactgtgacagggttctacgtgtga
DBGET
integrated database retrieval system
