Infirmifilum lucidum: IG193_06265
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Entry
IG193_06265 CDS
T06910
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
thel
Infirmifilum lucidum
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thel03016
]
IG193_06265
Enzymes [BR:
thel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
IG193_06265
Transfer RNA biogenesis [BR:
thel03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
IG193_06265
Prokaryotic type
tRNA splicing ligases
IG193_06265
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Complex1_LYR
Motif
Other DBs
NCBI-ProteinID:
QOJ79783
UniProt:
A0A7L9FL88
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All DBs
Position
1108855..1110237
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AA seq
460 aa
AA seq
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MRVPGLVIADEVLLAKMKEDLTLEQVANVAFLPGIYKYSIVLPDGHQGYGFPIGGVAAFD
AEEGVLSPGGVGYDINCGVRVLRTSLMESEVRPKLRELAETLFRKIPSGLGSTSGLELSF
SELDRVLEEGVEWAISRGYGWKEDVEHIEEGGRMEGADANAVSREAKQRGRNQLGTLGSG
NHFLEIQKVDKIYDPQIAKVLGIEREGQVTVMIHTGSRGLGHQVASDYLKIMERLVHKYK
MPLPDRELVSVPATSEEAQRYFAAMKAAANFAWTNRQVITHWVRESFRSVFKKDPDTIDL
RVIYDVAHNIAKLEEHLIDGKRVKVYVHRKGATRSFPPGHPDIPSDYKSIGQPVLIPGSM
GTASYILVGTQKAMELTFGSSPHGAGRVQSRAEARRSVRGQEIKNELESRGIVVRAASLA
VVAEEAPDAYKDVDRVVLVADAVGIAKKIVRMVPIAVVKG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgccaggcttagtaattgctgatgaagtcctgctagctaaaatgaaggaggat
ctgactctagagcaagtagccaatgttgctttcctgccaggaatatacaagtattctatt
gtactcccagacgggcaccaaggatatggtttcccgataggtggcgtagcagccttcgac
gccgaggaaggagtcctcagtccggggggtgtcggctacgacataaactgcggagtaagg
gtgcttcggacaagccttatggagtctgaggttaggcctaaactgcgagaactcgctgaa
acactgttcaggaagatcccctcaggacttggaagcactagcgggctcgagctgagcttc
agcgagcttgatagagttctcgaggaaggtgtcgagtgggcaatttctcgtggatacggc
tggaaggaagacgtcgagcacatcgaggaaggcgggaggatggaaggcgcagacgccaat
gctgtgtcaagggaagctaaacagagaggtaggaatcagctcggcacgcttgggagcggg
aatcacttcctagagattcagaaggtagataagatatatgatccccaaatagccaaagtc
cttggtattgagagggagggccaggtaactgtaatgattcacacggggagtagaggcctt
ggacaccaagtcgccagcgactacctcaagattatggagaggctcgttcacaagtacaag
atgccgttgcccgaccgagagctagtctctgttccggctacaagtgaagaagcacagagg
tacttcgccgcaatgaaggcggcagcgaattttgcatggaccaataggcaggtcatcact
cactgggtaagagaaagcttccgctctgttttcaagaaagatccagacactatagattta
cgtgtaatttacgacgtggcccataacattgcaaaattagaggaacatttaatagatggg
aagcgggtaaaagtatacgtacacaggaagggggctacgcgtagcttcccgccaggccat
ccagacataccgtcagactacaagagcattggacagcccgtgcttataccgggctcgatg
ggcacggccagctatatactggtcgggacgcagaaggccatggagctgacgtttggatct
tcgccgcacggcgcgggcagggtgcagagcagagccgaggcgaggcgtagcgttagaggg
caggagataaagaacgagcttgagagcaggggcattgtggtgagagcagcaagcctggcc
gttgttgccgaagaagctccagacgcatataaagacgtggacagagttgtgctcgtggcc
gatgccgtcggcatagcaaagaaaatcgtgagaatggttccgatagcggttgtcaaaggg
taa
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