Thermococcus aciditolerans: FPV09_00270
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Entry
FPV09_00270 CDS
T07677
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
them
Thermococcus aciditolerans
Pathway
them03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
them00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPV09_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
them03019
]
FPV09_00270
03009 Ribosome biogenesis [BR:
them03009
]
FPV09_00270
Enzymes [BR:
them01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPV09_00270
Messenger RNA biogenesis [BR:
them03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FPV09_00270
Ribosome biogenesis [BR:
them03009
]
Prokaryotic type
rRNA helicases
FPV09_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QEK13814
UniProt:
A0A5C0SKC4
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All DBs
Position
complement(46214..47506)
Genome browser
AA seq
430 aa
AA seq
DB search
MSFESLGLSEATLVAVRQKGFSSPTDIQREVIPRLLSGDVDIIGQSQTGTGKTAAFALPI
IEAIDPKIRAVQAIILTPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQIRALERG
THVVVGTPGRVLDHIRRGTLDLSGVKFFILDEADRMLDMGFIDDIGAIFRETPRKKRVLM
FSATMPPEIKRLARRYMGDYEVVSVSSDELVPEMVDQEYIEVVPARKLTMLRKILDGTGD
FYGIVFCATKRETRELSEKLRRAGYSAEALNGDMSQAARERTFWRFKTKKTRVLVATDVA
ARGLDVQDINYVVNYSLPMTAEDYVHRIGRTGRMGKKGKAMTFIMPGEFRRLRYIAQTAG
VEIRKSELSEEIPREYRERYERENQRNHGSRGYSRNSGRSRSYGRDGRSKKGGRSRRRNY
SDGYSHDYRY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaagcttaggcttatcggaggccacgttagtggccgtcaggcagaagggc
ttctcaagtccgacggatattcaaagggaggtaatcccgcgccttctatctggcgacgtc
gatataatcggccagtcccagacagggacgggaaaaacagcagcatttgcgctcccgata
atcgaggcgatcgatccgaagataagggccgttcaggcgataatcctcacgcccacgagg
gagcttgccctccaggtggcggatgaaatcaagagcctccgcgggaggaagagggtttac
gtttacgccgtctacggcggccagccgataggaccgcagataagggcccttgagcggggg
actcatgtcgtagttggaacccctggcagagttctcgaccacataaggcgcggaaccctc
gacctgagcggggtgaagttcttcatcctcgatgaggccgacaggatgctcgacatggga
ttcatagacgatataggggcgattttcagggagacgccgagaaagaagcgtgtgctgatg
ttctccgctacgatgccgccggagataaagaggctcgcgaggcgctacatgggtgactac
gaggtggtaagcgtcagcagcgacgagctcgtcccggagatggtggatcaggagtacata
gaggttgtcccggcgaggaagctcacgatgctcaggaagatactcgacggcaccggggac
ttctacgggatagtcttctgcgccaccaagagggaaacccgggagctcagtgagaagctc
aggagggctggctacagcgccgaggcactcaacggcgacatgagccaggccgcacgtgag
agaactttctggcgcttcaagaccaaaaaaaccagggttctcgttgcgactgacgtcgcc
gccaggggcctcgatgtgcaggacataaactacgtcgtgaactactccctgcccatgacg
gccgaggactacgtccacaggataggcagaaccggcaggatgggaaagaaaggaaaggcg
atgaccttcataatgcccggcgagttcaggaggctccgctacatcgcccagactgcgggt
gttgagatacgcaagtccgagctgagcgaggaaattccgcgcgagtaccgcgagaggtat
gagagggagaaccagaggaaccacggttcaagaggctactccagaaactcgggccgctcg
aggagctacggcagggacggaaggagcaagaagggtggaagaagcagaaggagaaactac
tccgacggctactcccacgattaccgctattga
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