Thermococcus aciditolerans: FPV09_00295
Help
Entry
FPV09_00295 CDS
T07677
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
them
Thermococcus aciditolerans
Pathway
them03022
Basal transcription factors
them03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
them00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FPV09_00295
09124 Replication and repair
03420 Nucleotide excision repair
FPV09_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
them03021
]
FPV09_00295
03036 Chromosome and associated proteins [BR:
them03036
]
FPV09_00295
03400 DNA repair and recombination proteins [BR:
them03400
]
FPV09_00295
Enzymes [BR:
them01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FPV09_00295
Transcription machinery [BR:
them03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FPV09_00295
Chromosome and associated proteins [BR:
them03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FPV09_00295
DNA repair and recombination proteins [BR:
them03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FPV09_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_30
AAA_19
SNF2-rel_dom
DUF7723
HerA_C
IstB_IS21
AAA_11
AAA_35
Motif
Other DBs
NCBI-ProteinID:
QEK13816
UniProt:
A0A5C0SJD1
LinkDB
All DBs
Position
complement(49154..51061)
Genome browser
AA seq
635 aa
AA seq
DB search
MTDYFPYENLRPNQRDFIELVSKAVENGENVIIEAPTGFGKTVSVLAGVLPHAKEMGYKV
LYLARTHRQMDRVIEELKAISRKSPVSGVELRSRKDLCLHTYLTQFTSDAYTAMVVCKNL
KKMGKCEFYENEKKKKAEFDELVRFFLGEPSHPAEILDYSQTLELCPYDLTKRIAEKADV
IVASYLYLLSPTIRENFISSLDLDYSDLIVVFDEAHNLPDQAISALSDKISINTINRAIK
EADEYNEHEIANFLSILGRGLEILFQEKLAGRDVQETAIQPELVFSHVVDVLGLDTRWLV
KTLNDMVAVGDSIREDRIEKGKPPRSYIGRVGEFLLLWLSLIGREDYLFLLSRDRGLSLE
LVALDPSKALGFIKDVQSAIFMSGTLTPLEAFRDVMGVENARLKKFPRMVKRENAQVLVA
KDVSTRGDERSLQVYRKMVDYIVEAARIIPKNVGVFAASYEVLQGLLSANLQVRLEETGK
AVFIEKQGVSSAENDLMVAQFKAHARGNGAVLLGVMGGRNSEGQDYSGDEMNGVVLVGIP
YARPTPRVQARIRYFERKFPEKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGSIVVLDYRL
LWRGIKKDLPDWMVETVRPVDLGRMRLYLKRFWAT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactactttccatacgaaaacctgcgaccgaaccagcgcgatttcatagaactg
gtctcaaaggcagttgaaaacggagaaaacgtcatcatcgaggcgcccacaggattcgga
aagaccgtgagcgttctggctggagtactcccccacgccaaggaaatgggctacaaggtg
ctctacctggccagaacccacaggcagatggacagggtcatagaggagctgaaggcgata
agcaggaagagccccgtttccggcgttgagctcaggagcaggaaggacctctgcctgcac
acgtacctcacccagttcacgagcgacgcctacaccgccatggtcgtctgcaagaacctc
aagaagatgggcaagtgcgagttctacgagaatgaaaagaagaaaaaggcggagttcgac
gagctggtgcgcttcttcctcggagagccgagtcaccccgcggagatactcgactactcg
cagaccctggagctgtgcccctacgatttaaccaagaggatagcggagaaggcggacgtg
atagtcgccagctacctctatctcctcagccccaccatacgggagaacttcataagctcc
ctggacctcgattactccgacctcatagtcgtctttgacgaggcccacaaccttccggat
caggcgatttcagcactcagcgataaaataagcataaacacaatcaacagggcaataaaa
gaggccgacgagtacaacgagcacgagatagcaaacttcctgagcatcctaggcaggggg
ctggagatactgttccaggaaaaactggcgggcagggacgtccaggagaccgccatacag
cctgagctggtgttctctcacgttgtcgatgtccttggattggacacgagatggctcgtc
aagacactcaacgacatggtggcggtcggggattcgataagggaggacaggatagaaaag
ggcaaacctcctcgctcttacattgggcgcgtcggcgagttccttctcctgtggctctct
ctcatcgggagggaggactacctgttcctcctgagcagggacagggggctgagcctcgag
ctcgttgccctcgatccatccaaggccctgggcttcataaaggatgtccagagcgcgata
ttcatgtccggaacgctcaccccgcttgaggccttccgcgatgtcatgggcgtggaaaac
gcccgcctgaagaagttcccgaggatggtaaagcgcgagaacgcccaggttctggtggcc
aaagacgtctcgacgaggggcgatgagcgctcgctccaggtttacaggaagatggtggac
tacatagtggaagcggcaaggataatcccgaagaacgtcggggttttcgcggcatcctac
gaggttctccagggtcttctatcggcgaacctccaggttaggctggaggagacgggaaaa
gcagtcttcatcgagaagcagggtgtctcttcggctgagaacgacctcatggtcgcccag
ttcaaggcccacgcgaggggcaacggggcagtcctgctcggcgtgatgggcggcaggaac
agcgagggacaggactacagcggggacgaaatgaacggtgtggtgctcgtcggaatccct
tacgcgaggccaacgccgagggttcaggccaggataaggtacttcgaacgcaagttcccg
gagaagggcaggtactacggctactacctgccggcccacagaaagctcgtccaggctgcg
ggaagggtgcaccgttcggcggaggagaagggttcaatagtggtcctcgactaccgcctg
ctctggagagggataaagaaagacctgccggactggatggtggaaacggtgagacccgtt
gatctgggaagaatgcggctctacctcaagaggttctgggctacctaa
DBGET
integrated database retrieval system
