Thermococcus aciditolerans: FPV09_00505
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Entry
FPV09_00505 CDS
T07677
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
them
Thermococcus aciditolerans
Brite
KEGG Orthology (KO) [BR:
them00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
them03400
]
FPV09_00505
DNA repair and recombination proteins [BR:
them03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FPV09_00505
Archaeal homologous recombinant proteins
FPV09_00505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
GAS
Rad50_zn_hook
BLOC1_2
AAA_29
AAA_21
ABC_tran
EzrA
MscS_porin
SbcC_Walker_B
DUF5713
VRR_NUC
ABC_tran_CTD
DUF6074
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QEK13850
UniProt:
A0A5C0SI30
LinkDB
All DBs
Position
complement(90691..93354)
Genome browser
AA seq
887 aa
AA seq
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MRIRRIKIRNFRAHEMSEVEFSDGINLLIGQNGAGKSSILEAIFAALYMGHPSFPRGYLQ
ANTRVGSTGGLGLTLEFEHNGKSYRIVRDSKKSELLEDRETIAEKSSDVARWVERNVYPI
QVFTNALYIRQGEIEGIITNREVMEKVLRKVLGIEDYENAERNAADVIRELKRRRDYLRK
LIERKAEVEENLREAQGRFSETLRRISELRKRVGELEGAFRKAEEDYSRLKALKSELEGL
EKRRAVLEQRIKAEKGRIEDYRAQIEEVKREIGELEEKLARLRELEPLEKEYLKLKSLLS
LKDELSKLETAEARLAEKRKALEERAARIDEVSAKIAELEGEEKSLRETYEELKRKNGLY
QRALQRKAEAERYLKELERAGVTPESLEKELKAVENAKEELENLRKEVTGIREEIATLKG
LKESLTENLSKLEGARVCPLCKRPIEEHDEEEIRAEYDAEITSIEKKLNRLSKKLKKLNE
REIELKGVIKRESKLIMLKKTADLLREVEEKLAKYDLEELEKAAEEFEKAKARLIEIKKE
LRYLREELEELEKAKDELGRIEKKLQEIGRETRRIMERLENEGFGSFEAVEERMKELEPA
YREYLSLKDVPVQLERTKKKLSLLERRLDESIEALRKLEGEFRELGAEMEKLSREFSEEA
YAEAEKRYMATARELEKARAELKGAEELRDEVMKLLDELKAKRKEIEGAEKELETVEKAM
ADMTAFKEKVARLKAEEELRGLEEVQKLAGETFSEMTEGKYQGIKLKREKKFGKERIELK
VLYAGNEVGLEFLSGGERIALGLAFRLALSLYKVGNLELLILDEPTPFLDEERRKKLVEI
ISSQLRKIPQVIIVSHDEELKDAADYVIRVLNVGGKSRVEVESIGAY
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaggataaggaggataaagatcaggaacttcagggcacacgagatgagcgaagtggag
ttcagcgacggcataaacctgctgataggccagaacggcgccggcaaaagctcgatcctc
gaggcgattttcgcggccctctacatggggcacccgagcttcccgaggggctaccttcag
gcaaacacccgcgtcggctcgacagggggactgggattaacactggagttcgagcacaac
ggaaagagctacagaatcgtcagggactccaagaagagcgagctccttgaggacagggaa
acgatagcggagaagagctccgacgtggcgcgctgggtcgagaggaacgtctacccgatc
caggtattcaccaacgcgctctacataaggcagggtgagatagagggtataatcacgaac
cgcgaggtaatggaaaaggttctgcgcaaggttctgggcatagaggactacgagaacgcc
gagaggaacgcggcggacgtgataagggaactcaagcggaggagggactacctcaggaag
ctcatcgagagaaaggccgaggtggaggagaacctccgcgaggctcaggggcgcttctcc
gagacgctgaggaggataagcgagctccggaagagagttggagaactcgaaggtgccttc
aggaaagcggaggaggattactcgcgcctcaaggccctgaagagtgagcttgaggggctg
gagaagaggagggcagtcctggagcagaggataaaggcagaaaaaggtagaatagaggat
tacagggcccagatcgaggaagtgaagagagagataggagaacttgaggagaaactcgca
cgcctcagagagctcgagcccctcgaaaaggagtacctgaagctgaagtcgctcctctcc
ctcaaggacgagctatcaaagcttgaaaccgccgaagcaagactggcggagaagagaaag
gccctcgaagagagagctgccaggatcgatgaggtctctgcaaagatagcggagctcgaa
ggggaggaaaagtccctccgcgagacctacgaggagctgaagaggaagaacggcctctac
cagcgcgccctccagaggaaggccgaggcggagaggtatctgaaagaactcgagcgggca
ggggtcacccccgagagcctggaaaaggagctaaaagctgtcgagaacgccaaagaggag
cttgagaacctccgcaaggaagtgaccgggataagggaggagatcgcgactctcaaagga
ctgaaggaaagcctaaccgagaacctctcgaagctggaaggcgccagggtctgcccgctg
tgcaagaggcccatcgaggagcacgacgaggaggagatacgggcagagtacgacgccgag
ataacctccatcgagaagaagctgaataggctatcaaagaagctcaaaaagctcaatgaa
cgggaaatcgagctcaagggagttatcaagagggagtcaaagctcataatgctgaagaag
acggcggacctcctgagggaggtcgaggagaagctggcgaagtacgacctggaggaactc
gagaaggccgcggaggagtttgaaaaggccaaggcaaggctcatcgagataaagaaggag
ctgaggtacctcagagaggagcttgaggagcttgagaaagcaaaagacgagctggggagg
atagagaaaaagctccaggagataggcagggaaacgaggaggataatggaaaggctggag
aacgagggcttcggctcgttcgaggctgtcgaggaaaggatgaaggagctcgagccagcc
taccgcgagtacctctcgctcaaggacgtcccggtccagcttgagaggacgaagaagaag
ctctccctcctggagaggaggctcgatgagagcatcgaggccctcagaaaactggagggg
gagttcagggagctgggggcggagatggaaaaactctcgcgggagttctcggaggaagcc
tacgccgaggccgagaagaggtacatggcgaccgcgagggaacttgagaaagccagggcg
gagctcaagggcgctgaagagctgagggacgaggtaatgaagctcctcgacgagctgaag
gcaaagaggaaggagatagaaggggccgaaaaggagctggagaccgtcgagaaggctatg
gcagacatgaccgcgttcaaggagaaggtggcgaggctcaaggccgaggaggaactcagg
gggctcgaggaggtacagaagctcgccggcgagaccttctcggagatgacggagggcaag
taccaggggataaagctcaaacgcgagaagaagttcggaaaggagcggatagagctgaag
gtgctctacgccggcaacgaggtcggtctggaattcctgagcggtggggagagaatagcg
ctcggactggccttccgcctggcgctctcgctctacaaggtggggaaccttgagcttctg
atcctggacgagcccacgcccttcctggatgaggagcgcaggaagaagctcgtggagata
atatcgagccagctgaggaagataccgcaggtcataatcgtttcccacgacgaggagctg
aaggacgcggcggactacgtgataagggtcctgaacgtcggcggcaagagccgcgtggag
gtggagagcattggagcgtattag
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integrated database retrieval system
