Thermococcus aciditolerans: FPV09_01325
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Entry
FPV09_01325 CDS
T07677
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
them
Thermococcus aciditolerans
Brite
KEGG Orthology (KO) [BR:
them00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
them03019
]
FPV09_01325
Messenger RNA biogenesis [BR:
them03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
FPV09_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
ATPase
Motif
Other DBs
NCBI-ProteinID:
QEK13981
UniProt:
A0A5C0SI13
LinkDB
All DBs
Position
complement(250790..253387)
Genome browser
AA seq
865 aa
AA seq
DB search
MLFVVRPGRKKNELEAFFIENEPEKLTAMKNLKAERIYRFIMREGRLFKVLEGSQYRNPK
EIEKLLRQARIVLVNADEWEDYFRRRLQNKRVERAELCRLCLLDGRVTVLTEGNRIKYHG
EYICERCAEDELKRELRFRFRSVAMFDQAKKLLDRFRDLDKVLYAFDPRFDPTRHPEITK
WDELKAKHVRVEKILLDELPLPEKFKSVLKAEGVNELLPVQSLAVKHGLLEGESLLVVSA
TASGKTLIGELAGVPKAMKGRKMLFLVPLVALANQKYEDFKRRYSRLGLRVAIRVGMSRI
KTRDELVVVDTGIDADIIVGTYEGIDYLLRAGRKIGNVGTIVIDEIHTLDDEERGPRLDG
LIARLRKLYPSAQFIGLSATVGNPGELARELGLKLVLYDERPVDLERHIIIARNESEKWR
HIVVLCRAEAMRKSRQGYKGQTIVFTFSRKRTHELAAYLTSKGLKAKPYHSGLPYKQRKL
TEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYH
EKGRVYLIVEPGRKYSAQMEGSEDEVAFKLLTAPIEPVMVEWSDELEQDNVLAHSCVFNR
LDVIEDIQSKCLGANQSAEKVLEKLEEHGFVRLKGPSVEVTPYGRAVSMSFLLPKEASFI
RKDLGKKPAQWIAVKLLPFENLYLSGTLQRELEGAVRGRLSANVFSPSFASILDELDRVI
PELSPNAAERLFTLYQEFFMCPEEDCTDYAMERVSNLIIELRRNGKHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAIERIARVFHVRNAEEEAKVLKREIEEGRTIRKDYGDKRG
RRDQGKPRRRNQTRKGLDRRGKRSG
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgtcgtgagacccgggagaaagaagaacgagcttgaggcattctttatcgag
aacgagccggaaaagctcaccgcgatgaagaacctgaaggctgagaggatataccgcttc
ataatgcgcgaggggaggctcttcaaggttcttgagggaagtcagtatcgcaatccgaaa
gagatagagaagcttcttcgccaagccagaatcgtcctggtgaacgccgacgagtgggag
gactacttcaggagaaggctccagaacaagagggttgaaagggccgagctctgccgtctc
tgcctcctcgacggcagggtaaccgttctcaccgaaggaaaccgcattaaatatcatggc
gagtacatctgcgagaggtgtgcggaagacgagctgaagagggagctccgcttcaggttc
aggagcgttgccatgttcgaccaggcaaagaagctcctcgacaggtttagagacctcgat
aaggttctctacgccttcgacccccgcttcgacccgacgaggcatccggagataaccaag
tgggacgagctgaaggccaagcacgtgcgcgttgagaaaattctcctcgacgagctcccg
cttcccgagaagtttaaatccgttctcaaagcggaaggtgttaacgaactcctcccggtt
cagagtctggcagtaaagcacggcctccttgaaggcgagagcctcctagtagtttccgcc
acggcgagcggaaaaaccctaatcggcgaactggccggcgtcccaaaggccatgaagggc
cggaagatgctcttcctcgttcccctcgtcgccctggccaaccagaagtacgaggacttc
aagcggaggtactccaggctcgggctgagggtggcgataagggttggaatgagcaggata
aagacccgggacgagcttgtggtggttgatacaggcatcgatgccgacatcatagtggga
acctacgagggcatagactacctcctcagagctgggaggaagataggaaacgtcggaacc
atcgtgatagacgagatacacaccctcgacgacgaggagagagggccccgcttggacggg
ctgatcgcgagattgagaaagctctatccgagcgcccagttcataggcctgagcgccacc
gtcggaaatcccggcgaactggccagggaactggggttaaaactggtgctctacgacgag
agaccggtggatttggagaggcacataatcatagctagaaacgagtccgagaagtggcgt
cacatagtggttctctgccgggcggaggcgatgaggaaatcccggcagggctacaagggg
cagacgatagtcttcaccttctcgcgcaagaggacgcacgagcttgccgcttacctcacg
agcaagggcctcaaagccaagccctaccactccggtttaccctacaaacagaggaagctc
accgagatggagtttttagcccaaaggctcgacgtcgttgtaaccacggcggcgttggga
gccggcgttgactttcccgcttcacaggtcatctttgagagcctcgccatgggcaacaag
tggctgagcgtgagggagttccaccagatgcttgggagggctggaaggccgctctaccac
gagaagggcagggtctacctcatcgttgagcctgggagaaaatattccgcccagatggaa
ggcagcgaggacgaggttgccttcaagcttttgaccgctccaattgagcccgtgatggtg
gaatggagcgacgagcttgaacaggacaacgtcttggcccactcctgcgtcttcaaccgg
ctcgacgtcatcgaggacattcaatccaagtgcctcggtgccaaccagagcgcggaaaag
gttctcgaaaagcttgaggagcacggcttcgtccggctcaaggggccgtctgtggaggtc
acgccctacggaagggccgtgagcatgagcttcctcctgcccaaagaggcgtcattcata
aggaaggacctcgggaagaagcccgcccagtggatagcagtcaagcttttgccgttcgaa
aacctttacctgagcggaacgctccagagggagcttgagggggcagttaggggaaggctg
agcgccaacgtcttctcgccgagctttgcctcgatccttgatgaacttgatcgagttatc
cccgaactcagccccaacgcggcggagaggctcttcacgctctaccaggagttcttcatg
tgtcctgaggaggactgcaccgactacgcgatggagcgcgttagcaatctgataatcgag
ctgaggaggaacggtaagcacccaacccagatagcagaacacttcagaaaggtctacggg
ctgatagtctatcctggagacgtcttcacgtggctcgacggcatcgtgaggaagcttgag
gcgatagagaggatcgcgagagtcttccacgtgaggaacgccgaggaggaggcgaaggtt
ctgaagagggagattgaagagggcagaacgatacgcaaggactacggggacaagagaggc
cggagagaccaaggaaaaccgaggaggcggaaccagacccgaaaaggactggatagaaga
ggaaaaaggagtggctga
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