Thermococcus aciditolerans: FPV09_11725
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Entry
FPV09_11725 CDS
T07677
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
them
Thermococcus aciditolerans
Pathway
them04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
them00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FPV09_11725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
them03019
]
FPV09_11725
03009 Ribosome biogenesis [BR:
them03009
]
FPV09_11725
04131 Membrane trafficking [BR:
them04131
]
FPV09_11725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
them04147
]
FPV09_11725
Messenger RNA biogenesis [BR:
them03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FPV09_11725
Ribosome biogenesis [BR:
them03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FPV09_11725
Membrane trafficking [BR:
them04131
]
SNARE
SNARE associated proteins
Others
FPV09_11725
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FPV09_11725
Exosome [BR:
them04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FPV09_11725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_22
CDC48_2
TIP49
AAA_5
AAA_14
nSTAND3
AAA_33
Vps4_C
RNA_helicase
AAA_28
AAA_24
IstB_IS21
NPHP3_N
Mg_chelatase
Sigma54_activat
DUF815
AAA_7
AAA_18
AAA_lid_PRS2_C
Bac_DnaA
Parvo_NS1
ABC_tran
ATPase
ATPase_2
PhoH
AAA_17
TsaE
AAA_3
SLFN-g3_helicase
NB-ARC
Zot
COG3_C
HetE-N
Motif
Other DBs
NCBI-ProteinID:
QEK15637
UniProt:
A0A5C0SPC9
LinkDB
All DBs
Position
2138280..2140793
Genome browser
AA seq
837 aa
AA seq
DB search
MIFGKDEERYEKIKLRVAEALKRDVGRGIVRFDRKFQKQLGVEPGDIVELIGDRTTAAIV
ANPHPDDRGLDIIRMDGYIRRNAGVSIGDYVTVAKAEVQEAKKVTLAPAQKGVFIQIPGD
MVKQNLLGRPVVKGDLVVASSRGETYYGGSPFDELLRGLFETMPLGFGELKFVVVSTNPK
GVVQITYNTEVEVLPQAVEVREEAIPEVTYEDIGGLNDAIQKIREMVELPLKHPELFERL
GIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEVMSKFYGESEERLREIFKEA
EENAPSIIFIDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIAATNRPDAL
DPALRRPGRFDREIEVGVPDKKGRKEILQIHTRGMPLEPDYDRETVLRVLKELLKKKAFD
EEVLKKLVERVEGARSSDEVKEILKSASEVYPEVRTRLIDRMLERIAEKTHGFVGADLAA
LAREAAMVVLRRLINEGKISPEHEKIPPEVLQELRVRKADFYEALKMVDPSALREVLIEM
PNVRWEDIGGLEEVKQELKEAVEWPMKYPKAFQRLGIEPPRGVLLYGPPGTGKTLLAKAV
ATESEANFIGIRGPEVLSKWVGESEKRVREIFRKARQAAPTVIFIDEIDAIAPARGMEGD
RVTDRLINQLLTEMDGIERNSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPDEKARL
EILRVHTKRVPLAGDVNLRELAKKTEGYSGADIEALVREAALLAMRRIMREMPAEVVEEE
SEEFLERLRVSRKDFEAALKKVRPSITPYMVEYYQNFDENRKKRTGKKTEGPDYYTF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcggtaaggatgaggagaggtacgagaagattaagctccgcgttgcagaggcc
ctgaagagggatgttggcagaggaatagtccggttcgataggaagttccagaagcagctt
ggagtggagccgggtgacatcgtggagctgataggtgaccgcacaaccgccgcgatagtg
gccaacccccacccggacgacaggggactcgacatcatcagaatggacggctacatcagg
aggaacgccggggtcagcataggcgactacgtgacggtagcgaaggccgaggtgcaggag
gcaaagaaggtcaccctcgccccggcccagaagggcgttttcatccagatacccggcgat
atggtgaagcagaacctcctgggaaggcccgtggtgaagggagacctggtggtcgccagc
agcaggggggagacctactacggcggctcgccctttgacgagctgctcagggggctcttc
gagacaatgcctctcgggttcggggagctgaagttcgtggtggtcagcaccaaccccaag
ggcgtcgtccagataacttacaacaccgaggttgaggtcctcccgcaggcggttgaggtg
cgcgaggaggccatcccagaggtcacctacgaggacatcggcggcctgaacgacgccatc
caaaagatacgcgagatggtggagcttccgctcaagcacccggagctctttgagcgcctt
ggaattgaaccgccgaagggtgttctgctctacggcccgcctggaacaggtaagactctc
ctggccaaggccgttgccaacgaggccaacgcgcacttcatagccatcaacggccccgag
gtcatgagcaaattctacggtgagagcgaggagcgtttgagggagatattcaaggaggcc
gaagagaacgcccccagcatcatattcatcgatgagattgacgcgatagctcccaagaga
gaggaggtcgttggggaggttgaaaaacgcgttgtcagccagctgcttactctgatggac
ggcctgaagggacgcgggaaggtcatagtcatagcagctaccaacaggccggatgccctg
gatccagccctcagaaggcccggacgcttcgacagggagatagaggtgggggttcccgac
aagaagggcaggaaggagatactccagatacacacgaggggaatgcccctcgagccagat
tacgacagggagaccgtcctcagggtcctgaaggagctcctcaaaaagaaagcctttgac
gaggaggttcttaaaaagctggtggagcgcgttgagggggccaggagcagcgacgaggtg
aaggagattctgaagagcgcgagcgaggtttaccctgaggtcagaaccaggctcatcgac
aggatgctcgagagaatcgcggagaagacgcacggcttcgtcggcgccgacctcgccgcc
ctcgccagggaggccgcaatggtcgtcctcaggaggctcataaacgagggcaagataagt
cccgagcacgagaagatacccccagaggttctccaggaactccgtgtgaggaaggcggac
ttctacgaggccctcaagatggtggacccaagcgcgctcagggaagtgctaatcgagatg
ccaaacgtccgctgggaggatataggcggcctcgaggaggtaaagcaggagctcaaagag
gcggtcgagtggccgatgaaatatcccaaggcgttccagaggctcggcattgaaccgccg
aggggtgtgctcctctacggcccgcccggaacaggtaagacgctcctagctaaggccgtg
gcgacggagagcgaggccaacttcatcggcatccgcggtccggaggttctcagcaagtgg
gtgggcgagagcgagaagcgcgtgagggagatattcaggaaggccaggcaggcggctccg
acggtgatattcatagacgagattgacgcgatagcccccgccaggggcatggagggcgac
cgcgttacggacaggctcatcaaccagctcctcaccgagatggacggcatagagcgcaac
agcggcgtggttgttatagccgcaacgaacaggccggacatcctcgacccagctctgctg
agacccggcaggttcgacaggctcatactcgttccagcgccggacgagaaagctaggctg
gagatactcagggtccacacgaagcgcgtacccctggcaggggacgtcaacctcagggag
ctcgcaaagaagaccgagggatacagcggtgcggacatagaggccctcgtgagagaagcg
gccctgctggcgatgcgcaggataatgagggagatgccggcggaggtcgtcgaggaggag
agcgaggagttccttgagaggctcagggtttccaggaaggacttcgaggcggccctcaag
aaggtacgcccgagcataacgccctacatggtcgagtactaccagaacttcgacgagaac
aggaagaagaggactggaaagaaaacggagggacccgactactacaccttctga
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