Thermoflavifilum sp.: IMW88_04915
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Entry
IMW88_04915 CDS
T09844
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
theo
Thermoflavifilum sp.
Pathway
theo03420
Nucleotide excision repair
theo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
theo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMW88_04915
03430 Mismatch repair
IMW88_04915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
theo03400
]
IMW88_04915
Enzymes [BR:
theo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMW88_04915
DNA repair and recombination proteins [BR:
theo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMW88_04915
MMR (mismatch excision repair)
Other MMR factors
IMW88_04915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_11
ResIII
Patatin
GpA_ATPase
DEAD
Motif
Other DBs
NCBI-ProteinID:
QOR76877
LinkDB
All DBs
Position
1189619..1191910
Genome browser
AA seq
763 aa
AA seq
DB search
MHFLDELNDRQREAVEYIHGPLMVVAGAGSGKTKVLTARIAYLMERGVDPFHILALTFTN
KAANEMKARIERMLGSTEARNLYIGTFHSVFARLLRADAHRLGYPANFTIYDTDDSKSVL
KKIITELKLDEKHYRPGMVHHRISNAKNSLIGWQEYQQSDELLQEDARAGRPMIAKIYEW
YAKRCFQNGAMDFDDLLYQMYLLLTQFPDVLHKYQHKFQYILIDEYQDTNPAQYAIIKLL
GAVHENICVVGDDAQSIYSFRGATIQNILQFEKDYEDVKVVKLEQNYRSTRNILSVANEV
IAYNKRQLPKVLWTQNEEGEKIKLVSLLSEHEEGRFVADTIAEQKYRNHYANKDFAVLYR
TNSQSRSFEEHLRRLNIPYKVYGGLSFYQRKEIKDFLAYLRVIVNPKDEESLFRIINYPS
RGIGEKTLQKCLLIAREQGISVWEVMENIRKYHPPSTAINQIEDFVVMIKNLQLMLEKEN
AYTVAVQAGKMSGLVKELYNDKSVEGVSRYENVQELLNAIKEFTEMPDSEGELTDKSLGA
YLQQISLLTQTDEEKEESDVVKLMTIHAAKGLEFPCVFVVGLEEGLFPSAMSINTREELE
EERRLFYVAITRAKEKLWLTYTANRYRYGNSIQNDPSRFISELPPEFIETPFNRNYTTQR
DRSYTREKLQANRASSSIASLVQHKPPVAEHTPSPDFKPDDFRLMKPGMKVEHQKFGYGH
ILSIDGNASNPIATIRFELSGEKKIMLNYARLRIVHTDAMDSQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcctcgacgaactgaacgaccgccagcgtgaagcggtagaatatattcatggt
ccattgatggtggtggcgggtgccgggtccgggaagacgaaggtgctcaccgcccgtatc
gcctacctgatggagcgcggcgtagatccatttcatatactggcgcttacctttaccaac
aaggcggctaatgaaatgaaggcccgtattgaacggatgctgggcagcacagaagcacgc
aatctgtatatcggtacttttcattcggtgtttgcaagactcttgcgtgccgatgcacat
cggcttggttatccagccaattttacgatttacgataccgatgattcaaaaagtgtatta
aaaaagattattaccgagcttaaactcgatgaaaagcactaccgacccggtatggtgcat
catcgcatctcgaatgcaaaaaacagtttaatcggctggcaggaatatcagcaatccgat
gaactcctgcaggaagatgcccgggcaggaaggcccatgattgcgaagatttatgaatgg
tatgccaaacgctgttttcagaatggcgccatggattttgatgatctgttgtatcaaatg
tatttattgctcacccagttccccgatgtgttgcataaataccagcataagtttcaatac
attttaattgatgaatatcaggataccaaccctgcacaatatgccatcatcaagctgctg
ggagctgtacatgaaaatatttgtgtggtgggtgacgatgcacagagtatttattctttc
aggggggccaccatccagaacattcttcaatttgagaaagattatgaagatgtaaaggtg
gtgaaattggaacaaaactatcgcagcacacgcaacatcctgtcagttgcaaatgaagtg
attgcttacaacaaacgtcaacttcccaaagtattgtggacacaaaatgaggaaggagaa
aaaatcaaactggtatcccttttatcagaacatgaagaaggccgatttgtagccgatacc
atcgccgaacaaaaatacagaaatcattatgccaataaggattttgccgtactctatcgc
accaactcacagagccgtagttttgaagaacatctgcgcaggttaaatattccatacaaa
gtttatggtggactttcattctatcaacgaaaagaaattaaagattttctggcttatctg
cgcgtaattgtgaatccgaaagatgaagaaagtttgttccgtattatcaattatccatcg
cgtggaattggcgaaaaaacccttcaaaaatgcctgttgattgcacgtgaacagggcatc
tcggtctgggaagtcatggaaaatattagaaaataccatccaccttcaacggcaattaac
cagatcgaagattttgtggtgatgattaagaatctgcaactgatgctcgagaaggagaat
gcttataccgttgcagtacaggccggtaaaatgtcgggactggtcaaggaattatataat
gacaaaagtgtggaaggtgtttcgcgatatgaaaatgtacaggaattgttgaatgctatc
aaagaatttaccgaaatgcccgacagtgaaggtgagttaaccgataaaagtctgggtgct
tatttgcaacagattagcttattaacacaaactgatgaagaaaaagaagaaagtgatgtt
gtaaagctcatgaccattcatgcagcaaaggggctcgagtttccctgcgtatttgtggtg
ggactggaagaaggacttttccccagcgccatgtcaatcaatacccgcgaggaactggaa
gaggaacgacgactattttatgttgccattacgcgagctaaagaaaaattatggctaacc
tatacggccaatcgataccgttacggcaattctatacagaacgatcccagcagatttata
tcggagttaccacctgagtttattgaaacaccgtttaatagaaattataccacacaacgc
gacaggtcatatacgcgagaaaaattgcaggccaatcgtgcgtcgtcaagcatcgcatcg
cttgtacagcataagccacccgtggctgaacatacaccttcgcccgatttcaaacccgat
gattttcgtttgatgaaacccggtatgaaggtcgaacaccagaagtttggatatggccat
attctttctatcgatggtaatgcatctaatcctattgcaaccattcgttttgaattaagc
ggtgaaaagaaaatcatgttgaattatgcccgtttgcggattgtgcataccgatgcaatg
gattcacaatga
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