Thermoflavifilum sp.: IMW88_06250
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Entry
IMW88_06250 CDS
T09844
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
theo
Thermoflavifilum sp.
Brite
KEGG Orthology (KO) [BR:
theo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
theo03032
]
IMW88_06250 (gyrB)
03400 DNA repair and recombination proteins [BR:
theo03400
]
IMW88_06250 (gyrB)
Enzymes [BR:
theo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IMW88_06250 (gyrB)
DNA replication proteins [BR:
theo03032
]
Prokaryotic type
DNA Topoisomerases
IMW88_06250 (gyrB)
DNA repair and recombination proteins [BR:
theo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMW88_06250 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QOR74991
LinkDB
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Position
complement(1503026..1505008)
Genome browser
AA seq
660 aa
AA seq
DB search
MITDNQPVVTSSAHAYTAESIQILEGLEAVRKRPAMYIGDISSKGLHHLVYEVVDNSIDE
ALAGYCKHIKVIIHADNSITVEDDGRGIPTDIHPKDGRSGLEIVMTVLHAGGKFDKNTYK
VSGGLHGVGVSCVNALSEKLHVLVHRDGKIFEQEYRRGVPLYPVRVIGTTDRTGTIIHFS
PDPTIFTTLTFNREILATRLEELAYLNKGVRIELVDERETDESSKEPHREVFYSEGGLEE
FLLMHENKAGRILLTPSPIYVNTFDESTYIAVEVAMVYHDAYGEHLFSYVNNINTIEGGT
HVAGFRRAVTRVIKAYGDRNKLFDKVKIEITGDDFRDGLSAVISVKVPEPQFEGQTKTKL
GNSEVMGVVDSAVGAALEAYLEEHPREARRIIEKVITSATARIAARNAREKVQRKGVLTG
SGLPGKLADCSDTDPARCELFLVEGDSAGGTAKQGRDRSFQAILPLRGKILNVEKAAEHK
IYDNEEIKNIFTALGVTIGTENDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFIFR
YMKELVEQGYVYIAQPPLYLIKKGNEHVYAWTEEERKKAIERLSGGKEGSVTVQRYKGLG
EMNAEQLWETTMNPATRTLKQVTLESAAEADRIFSMLMGEEVQPRREFIEKHARYANLDV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgacaaccagcctgttgtgacctcatccgcacatgcttataccgcagaaagt
atccaaatcctggaaggtcttgaagccgtaagaaagcggccagccatgtatattggtgat
atcagcagtaaggggctgcatcacctggtatatgaagtagtggataactccattgatgaa
gcgcttgccggatactgcaagcatatcaaagtcatcatccatgccgataattccattacc
gttgaggatgatggccgtggtattcccactgatatccaccccaaagacggtcgctccggt
ctggaaatcgtgatgacggtattgcatgccggcggtaagtttgataaaaatacctataaa
gtttccggaggattacatggcgtgggcgtcagctgcgtgaatgcactctccgagaaactg
catgtgctggtgcaccgcgatgggaagatttttgaacaggaatatcgtagaggcgttccg
ctgtatccagttcgggtcatcggaacaaccgatcgcacaggtaccatcatccatttcagt
ccggatcccacgatttttaccacccttactttcaaccgggaaatcctcgccacacgcctt
gaagaactggcttacctgaacaaaggcgttcgcatcgaactggttgatgaacgtgaaaca
gatgaatcaagcaaagaaccccatcgggaagttttttattcggaaggtggactggaagag
tttttattgatgcatgaaaacaaggcaggtcgcattctgctcacgccttcgcctatttat
gtaaatacgtttgatgaaagcacttatatcgccgtagaagtggccatggtatatcatgat
gcttacggcgaacatttgttttcttatgtaaacaacatcaataccatcgaaggaggcact
catgtggccggctttcgcagggcggtaacccgcgtcatcaaagcgtatggcgacagaaac
aagctgttcgacaaggtaaaaatcgaaatcacgggcgatgatttccgggacggattaagt
gcggtgatttcggtaaaagtgcccgagccccagtttgaaggacaaaccaagacgaagtta
ggcaattcagaagtgatgggtgtggtggatagtgctgtaggagccgctctggaagcctat
ctggaagaacatccccgcgaagcccgccgcatcatcgaaaaagtaatcacctctgccact
gcccgaatcgccgcccgaaacgcccgggaaaaggtgcaacgaaaaggggtgctcacggga
agcggactgccgggcaagctggctgattgttcggataccgaccccgcccgttgtgaacta
ttcctggtagaaggtgattcggcaggtggaaccgccaagcagggacgggatcggagcttt
caggctattcttccgctgcggggtaaaatcctgaatgtggaaaaagccgccgaacacaaa
atctatgataacgaagaaatcaaaaacatcttcacggcactgggtgtaaccatcggcacg
gaaaacgatgataaagccctgaatctgtccaagctgcgctaccataagctgatcatcatg
accgatgccgatgtggatggaagccatatcgccacccttatcctcaccttcatcttccgc
tacatgaaagagctggtggaacagggttatgtgtacatcgcccagccgcctctgtacctg
atcaaaaaggggaatgagcatgtatatgcatggaccgaggaagaacgcaaaaaagccata
gaacggctgagtggcggaaaagaaggcagtgtcaccgtgcaacggtacaaggggctgggg
gaaatgaacgccgaacaactctgggaaaccaccatgaatcctgctacccgtaccctgaaa
caggtaacgctggaaagcgctgctgaagccgaccgtatcttctccatgctgatgggcgag
gaagtacaaccacgcagagaattcattgaaaaacacgcccgctacgctaatctggacgtc
taa
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