Thermoflavifilum sp.: IMW88_07810
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Entry
IMW88_07810 CDS
T09844
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
theo
Thermoflavifilum sp.
Pathway
theo03030
DNA replication
theo03430
Mismatch repair
theo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
theo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMW88_07810
03430 Mismatch repair
IMW88_07810
03440 Homologous recombination
IMW88_07810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
theo03032
]
IMW88_07810
03400 DNA repair and recombination proteins [BR:
theo03400
]
IMW88_07810
Enzymes [BR:
theo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMW88_07810
DNA replication proteins [BR:
theo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMW88_07810
DNA repair and recombination proteins [BR:
theo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMW88_07810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QOR75270
LinkDB
All DBs
Position
complement(1841424..1842218)
Genome browser
AA seq
264 aa
AA seq
DB search
MSLHLKRPLVFLDLETTGTNVATDRIVEIAMVKIFPDGSRQVKVKRIHPGIPIPPEATAV
HGISDQDVAGCPSFKQVANEIKQFLDQCDLAGYNLHRFDIPMLVEEFLRAGQSFNLKDRH
IIDVQKIFFRMEPRDLSAAYRFYCGKEIQHAHSAEADATATYEVLQAQLKKYAELQACHD
LESLAKFTSDGDFVDVGRRMIRQNGEVLFNFGKHKGKPVRQVLTEEPQYYDWIMNGEFLL
DTKEKLTEIWNSLQLENLKRAGKV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcatttaaaacgaccactcgtttttctggacctggaaaccacaggcaccaac
gtggccactgatcgaattgtggaaatcgccatggtgaaaatttttccggatggttccagg
caggtaaaagtaaaacgtatccatcccggcatacccatacctccagaagcaaccgctgta
catggcatcagcgatcaggatgtggccggttgtccttcatttaaacaggtagccaacgaa
atcaaacaattcctcgaccaatgcgatctggctggatataacctgcatcgtttcgacatt
ccaatgctggtagaagagttcttacgggcgggacaatcatttaacctgaaagatcggcat
atcatcgatgtgcaaaagattttcttccgcatggagcccagagacctgagcgcggcctat
cggttttactgtggcaaagaaatccagcatgcccacagcgccgaggccgatgctaccgcc
acctatgaagtactgcaggcccagttgaaaaaatatgcagaactgcaggcatgccatgac
ctggaaagcctcgcaaaatttacgtcagacggcgattttgtggatgtcggccgccgcatg
atccgacaaaatggtgaagtgctgtttaatttcggtaaacacaaaggtaaacccgtccga
caggtgctcaccgaagagccccagtattacgactggataatgaacggcgaatttttactg
gatacgaaggaaaaattaaccgaaatctggaacagcctgcaactggaaaatctaaaacga
gccggtaaagtgtag
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