Thermoflavifilum sp.: IMW88_08615
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Entry
IMW88_08615 CDS
T09844
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
theo
Thermoflavifilum sp.
Pathway
theo03030
DNA replication
theo03430
Mismatch repair
theo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
theo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMW88_08615 (dnaE)
03430 Mismatch repair
IMW88_08615 (dnaE)
03440 Homologous recombination
IMW88_08615 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
theo03032
]
IMW88_08615 (dnaE)
03400 DNA repair and recombination proteins [BR:
theo03400
]
IMW88_08615 (dnaE)
Enzymes [BR:
theo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMW88_08615 (dnaE)
DNA replication proteins [BR:
theo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMW88_08615 (dnaE)
DNA repair and recombination proteins [BR:
theo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMW88_08615 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF1836
Motif
Other DBs
NCBI-ProteinID:
QOR75412
UniProt:
A0A7M1T974
LinkDB
All DBs
Position
2028474..2032103
Genome browser
AA seq
1209 aa
AA seq
DB search
MPRFSHLHVHTQYSLLDGASAISQLYQKAIADQMPALAITDHGNMFGVFQFVAEAYQHKL
HPDDPQDRRLKVKPIVGCEFYIVEDRFKRQFTREERDQRYHQVLLAKNEQGYRNLVKLCS
LGYIEGLYGKYPRIDKSLIQQYHEGLIATTCCLAASVPRMILKKSEEEAEQEFRWWLDIF
GTDYYIELQRHGIPEQDRVNAILLKWAKKYQVKTIATNDAHYVDQSDYNAHDILLCINTG
EKKSTPAIKEFADDDIVVRNKRFAFYNDQFYLKTTEEMNRLFADVPEAIDNTNEIVDKVE
LLDLKRQILLPHFPLPSGFLTQDQYLRHLTYEGARKRYTQLTPEIEQRINFELETIEKMG
FAGYFLIVADFIKAARDLGVFVGPGRGSAAGSVVAYCIGITNIDPIKYNLLFERFLNPDR
KSMPDIDTDFDDEGRQKVIDYVVKKYGRNQVAQIITYGTMAARMSIKDVARVLDLPLPEA
NALVRMVPERPGISLKRLLQAPIEGPDGLIEKEGLRPQEVDAVKQLREIATGNDLRASVL
KEAAILEGSIRNTGIHAAGIIIAPTDLTELIPVCTSKETDLLITQYEGSIIENAGVIKMD
FLGLKTLSIIKQTLEMIKKNHHQEIDIDNIPLDDPQTYALYQKGETNGTFQFESPGMQKY
LRELKPDKFDDLIAMNALYRPGPLEYIPDFIRRKLGLEPVTYDLPEMEEYLKETYGITVY
QEQVMLLSQKLAGFSKGDADTLRKAMGKKQKAVLDKMKTKFIEGCQRNGHDLKICEKIWG
DWEAFASYAFNKSHATCYAFVAFQTAYLKAHYPAEYMASVLNHASSIDKITFFMEECKRM
GLRVLGPDINESDKGFAVNAKGEIRFGLAGIKGVGEAVVEAILQERQTHGAFRSVFDLVK
RVGTRHVNRKALECLAMSGAFDCFQDMHRAQYFYKSDRDQTTGLEKIIKYASQHQATTIQ
QSASLFGEQIVDESPEPQLPDCQPWSLIEQLEKEKEVIGIYISGHPLDHYRFELTHYPIT
PIEELNQFIHQLNEQPGGNGKETNFRIAGFIAEAAHRTSKKGNKFGSLVLEDYSAKTEIV
LLGDDYVKFKAFLEPGLCVYIQGVVKTRYNGNYEFFVQQICLLEEIKRKLTKSLTLYLSP
AEINEQMITFFHRHVQSYPGKIPLFIQIEDKLHTAKVKLHANQHIEMNDELIQFLEQAKI
DAQVTIHNG
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgattttcgcatttgcatgtacatacgcaatactctttgctggacggtgcttca
gccatatcgcaattatatcagaaagccattgcagaccagatgccggcccttgccatcacc
gatcacggcaacatgtttggtgtatttcagtttgtggctgaagcctatcagcataagttg
catcccgatgatccacaggatcgacggctgaaggtaaagcccatcgtaggttgtgagttt
tatattgttgaagatcgtttcaaacgtcagtttacgcgtgaagaacgtgatcaacgttat
catcaggtgttactggctaaaaatgagcagggctatcgcaacctggtgaaattgtgttca
ctcgggtatattgaaggtttatacggaaaatatccgcgcatcgataaatcattaattcag
caatatcacgaaggcctcattgcaaccacctgctgcctggcggcttccgtgcctcgcatg
attttgaaaaaaagtgaagaggaagccgaacaggaatttcgttggtggctggatattttt
ggcacagattattacatcgagttgcaacggcatggcattcccgaacaggatcgggtaaat
gccatcttattaaaatgggcaaaaaaatatcaggtaaaaaccattgccaccaacgacgct
cattatgtggatcaaagtgattacaatgcacacgacattttactttgcatcaatacaggt
gagaagaaaagtacaccggcgattaaagaatttgcagatgatgacatcgtggtgcgtaac
aaacgatttgcattttacaatgatcagttttatttgaaaacaacagaagaaatgaatcgg
ctttttgccgatgtaccagaggctatagacaataccaatgaaattgtggataaggtggag
ttgctggatttaaagcgacagattttattgccgcatttcccgctgccatcgggctttctc
acacaggatcaatacctcaggcatcttacctatgaaggggcacgtaagcgttatacccag
ctcacaccggagattgagcagcggattaattttgaattagagacgatcgaaaagatgggc
tttgctggatattttttgatcgttgctgattttatcaaagccgcgcgtgatttaggtgta
tttgtagggccagggcgtggatcggcggcaggctccgtagtagcctattgtattggcatt
accaatattgatccgattaaatacaatttgctgtttgaacgttttctgaatcccgatcgc
aaaagcatgcccgatattgatacagattttgatgatgaaggcaggcagaaagtgattgat
tatgtggtaaagaaatatggtcggaatcaggtggcacagattataacttacggcaccatg
gctgcacggatgagcatcaaagatgtggcgcgtgtgctcgacctgcctttgcctgaagcc
aatgcactggtgcgtatggtacccgagcgaccgggcataagcctgaaacgcctgttacag
gctcctatcgaaggccccgatggattgattgaaaaagaagggttgcgtccgcaagaagtt
gatgcggttaaacaattgcgtgaaatagctacaggcaacgatttgcgtgcatctgtactt
aaagaagcagcaattctggaaggttctatacgcaataccggtatccatgcagccggtatt
atcatcgcacctaccgaccttaccgaattgattcctgtttgtacttcaaaagaaacggat
ttactcatcactcagtatgaaggaagtataattgaaaatgcaggcgtcattaagatggat
tttctgggtttgaaaaccctgagcatcatcaaacaaactcttgagatgattaaaaaaaat
catcatcaagaaattgatatcgataacattccgcttgatgatccgcaaacttatgctctc
tatcaaaaaggagaaaccaatggcacttttcagtttgaaagtccaggcatgcaaaaatat
ttgcgtgaactgaagcctgataagtttgatgatttaattgcgatgaatgcattatatcgt
cccgggccactggaatatattcctgatttcattcgacgcaagttaggactggagccggtt
acttatgatcttcctgaaatggaagaatatctgaaagaaacctatggcattaccgtttat
caggaacaggtgatgttgctttcacaaaaactggcgggtttctccaagggtgatgcggat
acgttgcgcaaagccatgggcaagaaacagaaggctgtgctcgataagatgaagaccaaa
tttatagaaggttgtcaacgtaatggccatgatttaaaaatatgtgaaaaaatctggggc
gattgggaagcgtttgcatcatatgccttcaacaaatcacacgcaacctgttatgcattt
gttgcttttcaaaccgcttacctgaaagcccactatccggctgaatatatggcctcggtg
cttaatcatgccagtagtatcgataagattaccttcttcatggaagaatgcaaacgcatg
ggtttgcgcgttttaggccctgatatcaatgagtcggataaaggatttgccgtgaatgca
aaaggagagatacggtttggactggctggcatcaagggtgtgggcgaggctgttgtggag
gctattctgcaggaacgccagacgcatggagcctttcgttcagtatttgatctggtgaaa
cgggtgggcacgcggcatgtgaatcgcaaagcactggaatgcctggctatgtcaggagct
ttcgattgtttccaggatatgcatcgtgcacagtatttttataaatcagaccgtgatcaa
acaaccggacttgaaaaaatcataaaatatgcttctcagcatcaggctacaaccattcaa
caatccgcttccttattcggggaacagattgtggatgaatcgcccgaacctcaactgccc
gattgtcaaccatggtcgttaatcgaacaactggaaaaggaaaaagaggtaatcggcatt
tatatttccggtcatccacttgatcattatcgatttgagctcacgcattatcccatcact
ccgatagaagaattgaatcagtttatccatcaactcaacgaacagcccggtggcaatggc
aaggaaaccaatttcaggatagctggctttattgctgaagcagctcatcgcaccagcaaa
aaaggaaataaatttggttcactggtcctggaagattattccgcaaaaacggaaattgta
ttgttgggcgatgattatgtgaaattcaaagcttttcttgaaccgggcctctgtgtgtac
atccagggagtagtgaaaacacgctataatggaaattatgagttttttgtgcaacagatc
tgtttgctggaagaaataaaacgtaagcttaccaaaagtttaacactttacctttcacca
gccgagattaatgaacaaatgattacatttttccaccgtcatgtacagagttatcctggt
aagattccgttgtttattcaaattgaagataagttgcatacagctaaggttaaattgcat
gccaaccagcatattgagatgaatgatgaattgattcaattccttgaacaggcaaaaatt
gacgctcaggtcacaattcacaacggttaa
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integrated database retrieval system
