Thermoflavifilum sp.: IMW88_10890
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Entry
IMW88_10890 CDS
T09844
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
theo
Thermoflavifilum sp.
Brite
KEGG Orthology (KO) [BR:
theo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
theo03032
]
IMW88_10890 (topA)
03400 DNA repair and recombination proteins [BR:
theo03400
]
IMW88_10890 (topA)
Enzymes [BR:
theo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IMW88_10890 (topA)
DNA replication proteins [BR:
theo03032
]
Prokaryotic type
DNA Topoisomerases
IMW88_10890 (topA)
DNA repair and recombination proteins [BR:
theo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMW88_10890 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
FGase
Motif
Other DBs
NCBI-ProteinID:
QOR75805
UniProt:
A0A7M1T7V5
LinkDB
All DBs
Position
complement(2572599..2574953)
Genome browser
AA seq
784 aa
AA seq
DB search
MAKNLLIVESPAKAKTIQKILGDDFEIKSCFGHIRDLDKDEMGVDIAHNYQPIYVIPPEK
KKIVEELKKLAQKAKEVWLATDEDREGEAISWHLAEVLGLDPLTTKRIVFHEITKPAIEK
AVQQPRTIDMNLVHAQQARRVLDRLVGFELSPLLWRKVSMKNALSAGRVQSVAVRLIVER
EREIMAFQPESSFQVEAVFSAPDARGKELHFKATGQSKIASAEEARRFLSSCAGARYVVK
DIEIKPARRSPAPPFTTSTLQQEASRKLGYSVSRTMLLAQKLYENGLITYMRTDSVNLSD
TAHEAIRHIIHQQYGQDYYQHRVFKNKNENAQEAHEAIRPTDMGMATIPDPDTRKLYELI
WKRTIASQMSDAQLEKTIVHIGISTSSFELIATGEVLKFEGFLKVYLEGKDEDEEENEQA
AGMLPAMEKGQLLRLISLQAIEKFTRPPARYTEASLVKKLEELGIGRPSTYAPIISTIQK
RKYVEKRDKEGTPRPYRILSLQDQEVTEQVATEITGAEKGKLFPTDLGMLVTDFLNQYFE
NIMDYGFTAKIEEEFDEIARGRKSWNQMIDMFYKPFHREVEKTLETAEKVKGERYLGDDP
QSGKPVYARMGRYGPMVQIGQADGQEKPRFAKLKKDQSIETITLDEALELFKLPRNIGEI
NGKEVIIQIGRYGPYALYDGKFYSLRKDMDPYTVELDEVAAWIAEKQADSDKKIIKQFDG
TDIQILRGPYGPYLKKGKQNYRLPKEWQDKPEQLSMEECEQIIQSAATSGKTRRAARRNT
PSKK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttactgattgttgagtcgccggcgaaagctaaaaccattcagaaaata
ctgggtgatgatttcgaaattaagtcgtgctttggccatattcgggatctggataaagat
gaaatgggcgtggatatcgcgcacaactatcagcccatttatgtgattccgcccgagaaa
aaaaagattgtggaagaattaaaaaagcttgcacaaaaggcaaaagaggtctggctcgct
acggatgaggatcgtgaaggggaagccatttcctggcatctggccgaggtgctgggtctg
gatccgttaaccaccaagcgtatcgtttttcatgaaatcaccaaaccggctattgaaaaa
gctgtgcagcaacctcgaaccatcgacatgaatctggttcatgcccaacaggcgcgtcgg
gtgcttgacaggctggtaggctttgagctatctccccttctctggcggaaagtgagcatg
aaaaatgccctttcggccgggcgggtacaatcggtagctgtgcgcctgattgtagaacgc
gaacgcgaaatcatggctttccagcccgaaagtagttttcaggttgaggccgtgttttcc
gcgcctgatgctcgagggaaagaattgcattttaaagccacgggtcaaagcaaaatagcc
agtgcagaagaagcgcgccgctttttaagttcctgtgcaggtgctcgctatgtggtgaaa
gatattgaaattaagcctgccagaagaagtccggctccacctttcaccacttccacattg
caacaggaggccagccgcaaactgggttattcggtgtccagaaccatgttgctggcacag
aaactatacgaaaacggattgatcacctacatgcgtaccgattccgtcaatctttccgat
actgcacacgaggccatccgccatatcattcaccagcaatatggacaggattattatcaa
catcgtgtgtttaaaaacaaaaatgaaaacgcacaggaagcgcatgaagccatacgtcca
acggatatgggaatggctaccataccggatcctgatacccgcaagttgtatgaacttatc
tggaagcgcactatagcaagtcagatgagtgatgctcagctcgaaaaaaccattgtccat
atcggtatttccacctcttcatttgaactcatcgcaaccggagaagtattgaaattcgaa
ggttttctgaaagtatatctcgaaggcaaagacgaagatgaagaagaaaacgaacaggca
gcaggcatgctcccggcaatggaaaaaggtcagttacttcgtcttatttccctgcaggcg
attgaaaaatttacccgtccgccggctcgttatacagaagccagtctggtaaaaaagtta
gaagaactgggtatcggtcgcccttcaacttatgcacccatcatctctaccattcaaaag
agaaagtatgtggaaaaacgcgataaagaaggcacaccgcggccttaccgtattttgtcg
cttcaagatcaggaagtaaccgaacaggtagccaccgaaatcaccggagctgaaaaagga
aaattattccccaccgatttaggtatgctggttaccgactttttgaatcaatattttgaa
aacatcatggattatggttttacggccaaaatagaggaagaattcgatgaaatcgcccgt
ggccgcaaatcatggaatcagatgattgacatgttctacaagccttttcatcgggaagtg
gaaaaaacactggaaacagctgaaaaagtaaaaggcgaacgttatctgggcgatgaccct
cagagcggtaaacccgtatatgctcgtatgggacgttatgggcccatggtgcagatcggc
caggccgatggacaggaaaaaccccgttttgccaagcttaaaaaagaccagagcattgaa
accatcaccctcgatgaagcactcgagctctttaaattacctcgtaacatcggcgaaatc
aacggcaaagaagtgattattcagattggcaggtatggaccttacgcgctgtatgacggt
aaattctattccctgcggaaagatatggatccttacaccgttgagctggatgaagtggct
gcatggattgctgaaaagcaggcggattccgataaaaaaatcatcaaacaattcgatggc
accgatattcagattctgcgggggccctatgggccttatctgaaaaagggtaaacagaat
taccgcttgcccaaggagtggcaggataagcctgaacaacttagcatggaagaatgtgag
cagattatacaatcggctgcaacatccggcaaaaccagaagagctgcccggagaaataca
ccgtcaaaaaaataa
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