Thermaerobacter sp. PB12/4term: DYI95_000045
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Entry
DYI95_000045 CDS
T06418
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DYI95_000045 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thep01007
]
DYI95_000045 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thep03016
]
DYI95_000045 (serS)
Enzymes [BR:
thep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DYI95_000045 (serS)
Amino acid related enzymes [BR:
thep01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DYI95_000045 (serS)
Transfer RNA biogenesis [BR:
thep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DYI95_000045 (serS)
Prokaryotic type
DYI95_000045 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
EzrA
FlgN
Laminin_II
FliJ
DUF2396
DUF3482
DUF641
PCRF
Motif
Other DBs
NCBI-ProteinID:
QIA26141
LinkDB
All DBs
Position
11855..13129
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AA seq
424 aa
AA seq
DB search
MLDLRFVRQHPEVVREALRRRRLDAADLDALLEADARWRQHLQRLEELRARRNETSEAIG
RLRREGADASELIAAMRQVGDTIKELEEQVRQLEQEIQDRLLRLPMIPDPEVPDGDDAGD
NVEVRRWGTPPEFGFEPRAHWDLGPALGILDFERAAKITGARFTVFRGLGARLVRALIQF
MLDLHTREHGYTEVLPPFLVHRQSMIGTGQLPKFEEDAFRVADSDFYLVPTAEVPVTNLY
RDEILDAGQLPIYHVAYTPCFRAEAGSAGRDTRGLIRQHQFDKVELVKFVHPEWSPEEHE
KLVADAEAVLQRLGLPYRVVLICTGDMGFAQARQYDLEVWMPSYGRYVEISSCSNYRDYQ
ARRANIRFRPEPGARPQFVHTLNGSGLAVGRTLAALLENYQQADGSVVIPPALRPYVGVE
VLRA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgctggacctgcgctttgtacgccagcatccggaagtggtgcgggaagccctgcgccgg
cggcgcctggatgcggcggaccttgacgccctgctggaggctgacgcccgctggcgccag
cacctgcagcggctggaggaattgcgggcccgccgcaacgagacttccgaggccatcggg
cgcttgcgccgtgaaggggccgatgcctcggaactcattgccgccatgcgccaggtgggc
gacaccatcaaggaactggaagagcaggttcgccagctggagcaggagatccaggaccgg
ctgctgcgtttgcccatgattccggaccccgaggtgcccgacggcgacgacgccggcgac
aacgtggaggtacgccgttggggcacgccgccggagttcggcttcgagcccagggcccac
tgggatctgggacccgccctggggatcctggacttcgagcgcgccgccaagatcaccggc
gcacgcttcaccgtctttcgcggcctgggcgcgcggctggtgcgggcactgatccagttc
atgctggacctgcacacccgggagcacggctacaccgaggtgttgccgccctttctggtc
caccgccagagcatgatcggcaccggccagctgcccaagttcgaggaggacgccttccgg
gtggccgattcggacttctatctggtccccacggcggaggtgcccgtcaccaacctctac
cgggacgagatcctggacgcgggccagctgccgatctaccacgtggcgtacacgccctgc
ttccgcgccgaggcggggtcggccgggcgtgacacccgcgggctgatccgccagcaccag
ttcgacaaggtggagctggtgaagttcgtccaccccgaatggtcgccggaggaacacgag
aagctggtggccgatgccgaggcggtgctgcaacgcctgggcctcccgtaccgggtcgtt
ctgatctgtacgggtgacatgggctttgcccaggcccggcagtacgacctggaggtctgg
atgcccagctacgggcgttacgtggagatctcgtcctgcagcaactaccgcgactaccag
gcgcgccgggcgaacatccgcttccgtcccgaacccggggcgcggccgcagttcgtccac
accctcaacgggtcgggcctggccgtggggcgcaccctggccgccctgctggaaaactac
cagcaggccgatggcagcgtggtgatcccgcccgccctgcgcccgtacgtgggggttgaa
gtgctccgggcgtga
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