Thermaerobacter sp. PB12/4term: DYI95_001565
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Entry
DYI95_001565 CDS
T06418
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep00470
D-Amino acid metabolism
thep00550
Peptidoglycan biosynthesis
thep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DYI95_001565 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DYI95_001565 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thep01011
]
DYI95_001565 (murD)
Enzymes [BR:
thep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DYI95_001565 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
thep01011
]
Precursor biosynthesis
Amino acid ligase
DYI95_001565 (murD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
DUF6752
Motif
Other DBs
NCBI-ProteinID:
QIA26393
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All DBs
Position
369182..370831
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AA seq
549 aa
AA seq
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MPAEGHAGPPPAARGVPLPPGSMVRQPEMRAAGRPGHGAAGLAVGHPSRGPGEPAARPPG
EHGVRRPGATPPLAGPVAVVGLGRSNRALVRYLLDRGIAVVGCDRVPPEQADPEIHQLAR
AGVELHLGPGYLRVLQERPFGTVFLTPGMKKDLPEIAAARAAGAAIRGEIDLFLERCRGR
VLGVTGSAGKTTTTSLLAEGLRQAAAPGGPLAGRPIFVGGNIGRPLIEEVDRIPPEALVV
LELSSFQLELCHRAPDVAVYLNLRPNHLDIHGTMEAYAAAKARIVELQEPDGWAVLNADE
PAPAGLAGRAPGRVAAFAASARAARELAEREAARRGGPVRAAYLAGERLVVWDGCGERPL
LEAGAMHLRGAHNRLNALAAILAGWVAGADPAGMAQAAAAFRGVEHRLEPVRELDGVRYY
NDSIATAPDRTLAALEAFTEPVVLIAGGYDKGIPFDPLGPTLCRRARAVVLLGRTAEAIQ
RVIEEAARREGRAPLIRRVASLEEAVAEARRLARPGDVVLLSPACASYDMFRDFAERGRR
FKELVMALS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggaggggcacgcggggccgccaccggcggcaaggggggtgccgctcccgcca
gggagcatggtgcggcagcccgagatgagggcggcagggcggccggggcacggcgccgcc
gggctggcggtggggcacccgagccgggggcctggagagcccgcggcccggcccccgggg
gagcatggggtccggcgtccgggagccacgccgcccctggccggtccggtggccgtggtg
ggacttggccgcagcaaccgtgccctggtccggtacctgctggaccggggcattgccgtg
gtgggctgcgaccgggtgccaccggagcaggcggacccggagatccaccagctggcccgg
gccggggtcgaactgcacctggggcccggctacctgcgcgtcctccaggagcggcccttc
ggcaccgtgttcctcaccccggggatgaagaaggacctgccggagatcgccgccgcccgg
gccgcaggggctgccatccgcggcgagatcgacctgttcctggaacggtgccggggcagg
gtcctgggggtcaccggcagcgccggcaagaccaccaccacctccctgctggccgagggg
ctgcgccaggcggcggcgcccggcgggccgctggcgggccgccccatcttcgtcggcggc
aacatcgggcgccccctgatcgaagaggtcgaccgcatcccgcccgaggccctggtggtg
ctggagctctccagctttcagctggagctctgccaccgggcgcccgacgtggccgtgtac
ctcaacctgcggcccaaccacctggacatccacggcaccatggaggcctatgccgcggcc
aaggcccgcatcgtcgagctccaggagccggacggctgggcggtcctcaacgcggacgaa
ccggccccggccgggctggcaggccgggcgcccggccgcgtggcggcctttgccgcctcg
gcccgggcggcgcgggagctggcggagcgggaagcggcccggcggggcgggccggtccgg
gcggcctacctggcgggtgagcggctggtggtgtgggacgggtgcggggagcggcccctg
ctggaggcgggcgccatgcacctgcggggcgcccacaaccgcctcaacgccctggcggcc
atcctggccggatgggtggccggtgccgatccggccggcatggcccaggccgccgcggcg
ttccgcggggtcgagcaccggctggagccggtgcgggagctggacggggtgcggtactac
aacgactccatcgccaccgcccccgaccggaccctggcggccctggaggctttcaccgag
cccgtggtgctgatcgccgggggctatgacaagggcatccccttcgatcccctggggccg
accctctgccggcgggcccgggcggtggtgctgctgggcaggacggcggaagcgatccag
cgggtgatcgaggaggcggcccggcgggaaggcagggcgccgctgatccggcgggtggcc
tccctggaggaggcggtggcggaggcccggcgcctggctcggccgggcgatgtggtgctg
ctgtccccggcctgtgccagctacgacatgttccgggactttgccgagcggggccggcgg
ttcaaggagctggtgatggccctgtcctga
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