Thermaerobacter sp. PB12/4term: DYI95_001855
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Entry
DYI95_001855 CDS
T06418
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep03030
DNA replication
thep03410
Base excision repair
thep03420
Nucleotide excision repair
thep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DYI95_001855 (polA)
03410 Base excision repair
DYI95_001855 (polA)
03420 Nucleotide excision repair
DYI95_001855 (polA)
03440 Homologous recombination
DYI95_001855 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thep03032
]
DYI95_001855 (polA)
03400 DNA repair and recombination proteins [BR:
thep03400
]
DYI95_001855 (polA)
Enzymes [BR:
thep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DYI95_001855 (polA)
DNA replication proteins [BR:
thep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DYI95_001855 (polA)
DNA repair and recombination proteins [BR:
thep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DYI95_001855 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DYI95_001855 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIA26445
UniProt:
A0A8T8D5T3
LinkDB
All DBs
Position
442424..445609
Genome browser
AA seq
1061 aa
AA seq
DB search
MDADRQPQVGGSRGATRSGGPRPRPAAGRAKTPPAGNEGGTGGGRRGGTGRSQGRGTGAP
SRPQELLAPEPEQLEDKLVLIDGHSLMYRAFFALPPLTTADGLPTNAVYGFLTMLLRLLE
EERPRYVVVAFDRGLPAFRVERYAAYKGHRPETPDDLRSQFPVVKEVLAALGIPMVEHDG
YEADDLLGTLARRAREAGVGRVLLVTGDRDVLQLVDDGIEVLLTRRGISDVHRYDAARIR
EEMGIDPAQYLDVKALMGDPSDNIPGVPGIGEKTALKLIQQLGDLESVLANPEAAGGKKL
PQALQEYADQARLSRDLARIRTDAPVDFDPQRWCRRPADAGLLRPLLLRLEFRSLVDRLG
LGQRTPQAGQVAAEPPGEGAGGAAGAPGTAAVAQGGVGAGEEEAGEEGARGEGAREEGAG
LPAQVDQLSAGDVAAWLDEVLGRPAAGTAPVPPDPGAADAAAAAGGVTVVAAWLGEAEGP
QGGAGAVLAGLGLAAAGRVGAWLAGEPEDADGDAAGRVLGALSGRPLAGFDLKPLYRWLL
RRAGAAGEVPGAATPAGEGSRGEAASRRAARPALPAPVADLKLAAYLLDPVRNRYHLVDT
ARQFFGWDLEEGPADRPGDPAVCTSSLLGRDAALCARLRPAVEAELAARGLERVYREIEL
PLVPVLAAMEEAGIAVDRRQLEELGRLFTRRSQELAEQIYELAGETFNINSTQQLGQILF
ERLGLPVVKKTKTGYSTDAEVLETLAAHHPIAELVLEYRSLVKLQGTYVDGLAEHIGPDG
RVHTTFQQTVAATGRLSSTQPNLQNIPIRDEPGRSLRRAFVAPPGHRLVAADYSQIELRV
LAHYSGDPGLVEAFAQGQDVHARTASEIFGVPLEQVTPEQRRVAKAVNFGLAYGQTDFGL
ARALRIDRADARRFMERYFERYPGVKRYMEETVRRARQQGEVTTLLGRRRPVPEIRHRVF
HIRQNAERVAINTPIQGTAADIMKLAMIRVHRALAEEGLRARIVLQVHDELLVEAPDAEV
AAVAALLRREMEGAFRLDVPLVVEVKAGANWYEMEAVDAGA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatcgccagccacaggtgggcgggtcgcggggcgcgacccggtcaggagga
ccgcggccccggccggcggccgggcgggcgaagaccccgccggcggggaatgagggtggc
accggcggcgggcgccggggagggacggggcgctcccagggccggggcaccggtgcccca
tcccggccccaggaactgctggcgcccgagccggagcaactcgaagacaagctggtcctg
atcgacgggcacagcctgatgtaccgggccttcttcgccctgcctcccctgaccacggcc
gacggcctgcccaccaacgccgtctacggctttctcaccatgctgctccgcctcctcgag
gaggagcggccgcggtacgtggtggtggccttcgaccgggggctgcccgccttccgggtc
gagcggtatgccgcctacaagggccaccggcccgaaacccccgacgacctgcgcagccag
ttcccggtggtcaaggaggtcctggctgccctggggatccccatggtggagcacgacggc
tacgaggccgacgacctcctgggcaccctggcccgccgcgcccgggaggcgggcgtgggc
agggtgctgctggtcaccggcgaccgggatgtgctacagctggtggacgacggcatcgag
gtgctcctcacccggcgcggcatcagcgacgtgcatcgctatgacgccgcccggatccgg
gaggagatggggatcgacccggcccagtacctggacgtcaaggcgcttatgggcgacccg
tcggacaatatccccggcgtgccgggcatcggcgagaagaccgccctcaagctgatccag
cagctgggcgatctggagtccgtgctggccaaccccgaggcggccgggggcaagaagctg
ccccaggcgctgcaagagtacgccgatcaggcccgcctgagccgggatctggcccggatc
cgcaccgacgcgcccgtggacttcgacccccagcgctggtgccgccggcctgccgatgcc
gggctcttgcggcccctgctcttgcgcctagagttccgcagcctggtggaccgcctgggc
ctgggccagcgcacgccccaggccggacaggtggccgcggaaccgcccggtgaaggtgca
ggcggtgccgccggcgcgccggggacggccgccgtggcccaggggggtgtgggagccggg
gaggaggaggccggggaagaaggcgcccggggagaaggggccagggaagaaggagcgggt
cttcctgctcaggtcgaccagctgtccgccggggacgtggccgcctggctcgatgaggtc
ctgggccgccccgccgccggtaccgccccggttcctccggaccctggcgcggcagatgcc
gccgcggccgccggtggcgtgacggtggtcgccgcctggctgggggaggcggaaggtccc
caggggggtgccggcgccgtgctggcgggcctcggcctggccgcggcgggcagggtgggc
gcctggctggcgggagagccggaggacgccgacggggacgcggccggtcgcgtcctgggg
gcgctgtccggccggccgctggccgggttcgacctcaagcccctgtaccggtggctgctc
cgccgggcgggcgccgcgggggaggttccgggtgccgccacgcccgccggggagggctcg
cggggtgaagccgcgtcccgccgggccgcccggcccgctcttccggcgccggtggcggat
ctcaagctggccgcctacctgctggacccggtgcgcaaccgttaccacctggtggacacc
gcccgccagttcttcggctgggacctggaggagggacccgctgaccgccccggcgacccc
gccgtttgcacctcctccctgctggggcgggatgcggccctgtgcgcgcggctccgcccc
gccgtggaggccgagctggccgcccgggggctggagcgggtctaccgggagatcgagctg
cccctggtgccggtgctggccgccatggaggaagcgggcatcgccgtcgaccggcgccag
ctggaggagctgggccgcctcttcacccggcgcagccaggagctggccgagcagatctac
gagctggcgggggagaccttcaacatcaactcgacccagcagctgggccagatcctgttc
gaacggctgggcctgcccgtggtgaagaagacgaagacgggttattccaccgacgccgag
gtcctggagaccctggcggcccaccaccccatcgccgagctggtgctggaataccggtcg
ctggtcaagctgcagggcacctacgtggacgggctggccgagcacatcggccccgacggc
cgggtccacaccaccttccagcagacggtggcggccacgggccggctctccagcacccag
cccaacctgcagaacatccccatccgggacgaacccggccgctccctgcgccgcgccttc
gtggcgccgccggggcaccggctggtggccgccgactactcgcagatcgagctgcgggtc
ctggcccactacagcggcgatcccggcctggtggaggccttcgcccagggacaggacgtc
cacgcccggacggccagcgagatcttcggggtgcccctggagcaggtgacccccgagcag
cggcgggtggccaaggcggtgaacttcggcttggcctacggccagacggacttcgggctg
gcccgcgccctgcgcatcgaccgcgccgacgcccgccgcttcatggaacgctacttcgag
cggtatcccggcgtgaagcggtacatggaggagacggtgcggcgggcgcgccagcagggc
gaggtgaccacgctgctcgggcggcggcggccggtgcccgagatccggcaccgggtcttc
cacatccggcagaacgccgagcgggtggcgatcaacacgcccatccagggcaccgctgcc
gacatcatgaagctggccatgatccgcgtccaccgggccctggcagaagaggggctgcgg
gcccgcatcgtgctgcaggtccacgacgagctgctggtggaggccccggacgcggaagtg
gctgccgtggccgccctgctgcgccgggagatggagggcgccttccgcctcgacgtcccc
ctggtggtcgaggtcaaggccggtgccaactggtacgagatggaggccgtggacgccggt
gcctga
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