Thermaerobacter sp. PB12/4term: DYI95_002400
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Entry
DYI95_002400 CDS
T06418
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep00750
Vitamin B6 metabolism
thep01100
Metabolic pathways
thep01240
Biosynthesis of cofactors
Module
thep_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DYI95_002400 (pdxS)
Enzymes [BR:
thep01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DYI95_002400 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
IGPS
NMO
TetR_C_27
NanE
His_biosynth
TMP-TENI
OMPdecase
IMPDH
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
QIA26538
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All DBs
Position
579010..579993
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AA seq
327 aa
AA seq
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MASDKLVGEAREPVPARAGQEPVPAGEPGREAARPLRGTWALKTGLARMLKGGVIMDVTT
PEQARIAEEAGAVAVMALERVPADIRAAGGVARMADPDRIRAIMEAVTIPVMAKCRIGHF
VEAQILEALGVDFIDESEVLTPADDRFHIDKHAFTVPFVCGARDLGEALRRIAEGAAMIR
TKGEPGTGDVAEAVRHMRRMNEQIRQACAAGEEELVALARDLGAPVELLQEVRRLGRLPV
VNFAAGGIATPADAALMMQLGADGVFVGSGIFKSENPAARARAIVEAVAHYDDPAWLARI
SGGLGEAMAGVAASSLAADQRMQQRSA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggccagcgacaagctggtgggagaggcccgggaacccgtcccggcccgggcggggcag
gagccggtcccggcgggggaacccggccgggaagccgcccggcccctgcggggcacctgg
gccctcaagacgggcctggcccggatgctcaagggcggcgtgatcatggacgtcaccacc
cccgagcaggctcgcatcgccgaggaggccggggcggtggcggtgatggccttggagcgc
gtgccggccgacatccgggcggcgggcggggtggcccgcatggccgacccggaccggatc
cgggccatcatggaggccgtgaccattcccgtcatggccaagtgccgcatcgggcatttc
gtcgaggcgcagatcctggaggccctgggggtcgacttcatcgacgagagcgaggtgctg
acccccgccgacgaccgcttccatatcgacaagcatgccttcaccgtgcccttcgtctgc
ggggcccgcgatctgggtgaggcgctgcgccgtatcgccgagggggcggccatgatccgc
accaagggcgagcccggcacgggcgacgtggccgaggccgtacgccacatgcggcgcatg
aacgagcagatccgccaggcctgcgccgcgggggaggaggaactggtcgccctggcccgg
gatctgggggcgccggtggagcttttgcaggaagtgcggcgccttgggcgcttgccggtg
gtgaacttcgcggcgggcggcatcgccaccccggccgacgccgccctgatgatgcagctg
ggcgccgacggggtgttcgtcgggtcggggatcttcaagtcggagaaccccgccgcccgg
gcccgggccatcgtggaggcggtggcccattacgacgatcccgcctggctggcccggatc
tcgggcggcctgggggaggccatggccggggtggcggcttccagcctggcggcagaccag
cggatgcagcagcgcagcgcctga
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