Thermaerobacter sp. PB12/4term: DYI95_003895
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Entry
DYI95_003895 CDS
T06418
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
thep
Thermaerobacter sp. PB12/4term
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thep03400
]
DYI95_003895
Enzymes [BR:
thep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DYI95_003895
DNA repair and recombination proteins [BR:
thep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DYI95_003895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QIA26777
UniProt:
A0A8T8D6J4
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All DBs
Position
954285..957938
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AA seq
1217 aa
AA seq
DB search
MSLRLILGRAGSGKTHYCLEAVAAAEGRHVSGPALVLLVPEQATFQMEQALLAAVRHRTG
RAGFARARVASFQRLAWWVQQETGGITRPAVSELGKRLILRALLSREAPRLQLFHRVADR
PGFIDRMVTTLAELAAFGIDAEALRRQREAWMAEGREGLLAVKLHDLALLLEAYQAYLED
KGLADPVHALDSVARRLGDCAWLRGARIWVDGFTGFTPGELRVLGALLAVADRVEVTLCL
DPAEAAWAVRGQLPGVPGAGGTPHGSDGPDAATLFHPTWQTARQLLELARRQRVTVEPAV
TLPPEGAGQRLPRFRNPALAHLERELFRFPGRRFTGAPDGITVVAAPDRRSEVAAAAREM
LRLAREEGYRFRDMVVIVRDLDAYHDLISSACAEHGIPLFIDRRRPVGHHPLVELVRAAV
EVVAADWPYEAVFRYLKTDLVPVARGAVDRLENYVLAFGIRGSLWYRVQPWRWRRRFTLE
EEEADDPAWQAELEAINRIREEATAALRNFHHRVAAARRQPVPVKVLAEALHHLLLDLDV
PGQILRWSEEAERAGDLEDAQEHLQVWNGVGDLLEQAATSLPDLPLTLADFLRVLEAGME
GLRVGLIPPGLDQVVAGSVERSRHPSARVAFLLGATDDAFPRRIDDDAIFTDGEREELAQ
AGLELNPPGRIRALHEQYHAYVALTRARDRLWVSYPLGDEEGRAITPAWLTRRLRVLFPA
LAVTPAVVEGPEGVATASQAVDQLVRMLGRQAVSPAAGEPAAAGWRILYQWAVTDPEARP
RALQALQSLVHSNQVEPLGQDLARQLYARPRGPEWEVRTSVSRLERLAACPFQHFAAHGL
GLKEREVSRLDAPQLGRIYHAALSLLARRVWERGLDWADLDEAALEQLVGEAVEALRPRL
SEELATSTAYQKHLLATARRILVKTASRLAHHARQGSFRPVAVEVDFGPESPVLPAAPWR
VGPGEHLALRGRIDRIDAACSPSGRWFLRVIDYKSSSRDLPLDRVYYGLSLQLPLYLLVA
TRAGRRLLSNMPGVPRSSAGAPASDPEPAGLLFFPVHDPYLDVKGPLDAGEIARLRAVKQ
LRPQGWVLDDDEVFDALGPRDQLDTLVPVRFRKDGRPEARSRVLGPERLEALFRHVEGRV
RAMAGAMLAGRADVAPYRLRDESPCSTCRFRAVCQFDPRVPGNHYRSIRPLSARDVWERL
EGAGRTERDGREGGEGG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgcggctgatcctgggccgggcggggtccgggaagacccattactgcctggaa
gctgtggccgcagccgaaggccggcatgtttccggacccgcccttgtcctgctggtgccc
gaacaggccacctttcagatggagcaggccctgctggccgcggtgcgccaccggacagga
cgcgccggcttcgcacgggcgcgggtcgccagctttcagcgcctggcctggtgggttcag
caagagacgggcggcatcacacggccggccgtcagcgagctgggcaagcgcttgatcctg
cgggcccttctctcccgcgaggcgccccgcctgcagttgtttcaccgggtagccgaccgt
ccgggcttcatcgaccgcatggtcaccaccctggccgaactggccgccttcgggatcgac
gccgaagcgctgcgccggcaacgggaggcctggatggcggagggccgggagggcctgctg
gccgtgaagttgcacgacctggcgctcctgttggaggcgtatcaggcctacctggaggac
aaggggctggccgatcccgtccatgccttggatagcgtggcccggcgacttggcgactgc
gcctggttgcggggggctcggatttgggtcgacgggttcacgggcttcacgccgggtgag
ctgcgggtcctgggggccttgctggcggtcgcggaccgggtcgaggtgaccctttgcctg
gacccggcagaggcagcgtgggcggtcagggggcagctgccgggggtacccggtgcgggc
gggacgccgcatggaagcgatggccccgatgcggcgaccctgttccaccccacctggcag
acggcccgccagcttctggaactggcgcgccgccagcgggtgaccgtcgagccggccgtg
acgttgccgccggagggggcgggccagaggctgccccgctttcgcaacccggccctggcc
catctggagcgggaactgtttcggttcccgggacgccgttttaccggtgcaccggatggg
atcacggtggtggcggcgccggaccggcggtccgaggtggcggcggcggcccgggagatg
ctgcgcctggcccgggaagaggggtaccggttccgggacatggtggtcatcgtccgggac
ctggacgcctaccacgacctgatcagttcggcttgcgccgagcacggcattccccttttc
atcgatcgccggcggccggtcggccatcaccccctggtggaactggtccgggcggcggtg
gaggtcgtggccgcggactggccctacgaggcggtgttccgctacctcaagacggacctg
gttcccgtggcccggggtgcggtggaccgcctggagaactacgtcctggccttcgggatt
cgcggttcgctctggtaccgggtccagccgtggcgctggcggcgccgcttcaccctggaa
gaggaggaggcggacgatccggcctggcaggcggaactcgaggcgatcaacaggatccgg
gaagaggccacggctgccttgcggaacttccaccatcgcgtcgccgcggcccggcgccag
cccgtgccggtcaaggtcctggcggaggctcttcatcacctgctgctggacctggacgtg
cccggccagatcctgcgctggagcgaggaggcggaacgagcgggtgatctggaggacgcc
caggagcacctgcaggtctggaacggggtcggcgaccttctggagcaggcggccaccagc
ctgcccgatctccccctgaccctggcggactttctgcgagtcctggaggccggcatggag
gggttgcgggtgggcttgatccctcccggcctggaccaggtggtggccggcagcgtggaa
cggtcgcgccaccccagtgcccgggttgccttcttgctgggcgccacggacgacgccttc
ccgcggcggatcgacgacgacgccatcttcaccgacggggagagggaggagctggcccag
gccggcctggagctcaatccccccggccggatccgggccctgcacgagcagtaccacgcc
tacgtcgccctgacgcgggcaagggaccggctctgggtcagctatcccctgggtgacgag
gaggggcgggccatcacgccggcctggctgacccgccgcctgcgggtgttgttccccgcc
ctcgcggtgacgccggcggtggtggagggtcccgagggcgtcgccacggcctcccaggcc
gttgaccagctggtgcggatgctgggacgccaggcggtttcgcccgcagccggcgagccg
gccgcagcggggtggcgaatcctctaccagtgggcggtgaccgacccggaggcccgcccg
cgggccttgcaggccctccagtccctggtccattccaaccaggtggaaccgctgggccag
gatctggcccgccagctctatgcgcggccccggggcccggaatgggaggtccggaccagc
gtcagccgcctggagcggctggccgcctgtccctttcagcactttgccgcccacggcctg
gggctgaaggagcgggaggtcagccgcctggacgcgccgcaactgggccggatctaccac
gccgccctgagcctgctggcgcggcgggtgtgggaacggggtctggactgggctgacctg
gatgaggcggcgctggaacagctggtgggagaggcggtggaagccctccggccccgtctg
tcggaagagctggccaccagcaccgcctaccagaagcacctgctggccaccgcccggcgg
attctggtcaagacggcctcgcgcctggcccaccatgctcgccagggtagcttccggccg
gtggccgtggaggtggatttcgggcccgagagtcccgtgctgccggccgccccgtggagg
gtaggacccggcgagcacctggcgctgcggggccggatcgaccggatcgacgcggcctgc
agcccgtcggggcgctggttcctccgcgtcatcgattacaagagcagttcccgcgacctg
cccctggaccgggtctactacggcctctccctgcagctgcccctgtacctgctggtggcc
acccgggccgggcggcgcctgctgagcaacatgccgggcgtgccccgctcctccgccggt
gcgccggcttccgaccccgagccggcggggctgctcttcttccccgtccatgacccgtac
ctggacgtcaagggccccctcgacgccggagagatcgcccggctccgggccgtcaagcag
ttgcggccccaggggtgggtgctagacgacgacgaggtcttcgatgccctggggccccgc
gatcaactcgataccctggtgccggtccggttccgcaaggacgggcgccccgaggcgcgc
tcccgggtgctgggcccagagcggctcgaggccctcttccggcacgtggaaggccgcgtg
cgggccatggccggcgcgatgctggcggggcgggcggatgtggctccctaccgtctccgg
gacgaatcgccctgcagcacctgccgcttccgggccgtgtgccagttcgatccgcgggtc
ccaggaaaccactaccggtccatccggcccctgagcgcccgggacgtctgggagcgcctc
gagggggccggccggacggaacgggacggccgggaaggaggggaaggtggatga
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