Thermaerobacter sp. PB12/4term: DYI95_005085
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Entry
DYI95_005085 CDS
T06418
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thep
Thermaerobacter sp. PB12/4term
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thep03016
]
DYI95_005085 (truB)
Enzymes [BR:
thep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DYI95_005085 (truB)
Transfer RNA biogenesis [BR:
thep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DYI95_005085 (truB)
Prokaryotic type
DYI95_005085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QIA26973
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All DBs
Position
1235939..1237192
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AA seq
417 aa
AA seq
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MTGAGRSRRAAGSPGGVVPVLKPPGMTSHDVVDWCRRLFGLRRVGHAGTLDPAAAGVLVI
CLGPATRLAEYLSEAPKAYRAEIWLGVTTDSLDSEGQRVEPPGPPPSRPAAELDEGMVRR
ALAALSGPQLQVPPAVSAVRQDGRRAYHRHREGEAVELEARPVTVYRFELLAWWPGPVPR
LLADVVCSKGTYVRALARDLGRALGVPALLGALVRTAQGAFRLEQAVTLEALAAAAGEGR
DQAAGAIPGEGERPAGAGAHGPIVPPAQALAFLPAWVLDPAEARRVVQGGRPRARSRPWD
RPPEAGMAMAGDAGTGGGAATGAPAGTPVPRPEGGRAEAAPPVTPLPQGTATPPVPRVPP
VPAGAGTRRAPGAGGGAAAGRVRLLDEDGRLLAVARLQRAGPGWAAVPEKVFPPELR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcgccggccgcagccgccgcgccgccggttcgcccggtggggtcgtgccggtg
ctcaagccgccgggcatgacctcccacgacgtggtggactggtgccgccgcctcttcggc
ctccgccgggtgggccacgccggcaccctggacccggccgccgcgggcgtgctggtgatc
tgcctcgggccggccacccggctggcggagtatttgagcgaggctcccaaggcgtaccgg
gcggagatctggctgggggtcaccacggacagcctggacagcgaggggcagcgggtggaa
ccgcccgggccgccgccatcccggccggccgctgagctcgacgaaggcatggtgcggcga
gcgctggccgcgctcagcgggccccagctgcaggtgccgccggcggtgagcgccgtccgc
caggacggccggcgagcctaccaccgccaccgggagggcgaggcggtcgaactggaggcg
cggccggtgaccgtctaccggttcgagctgctggcgtggtggcccggtccggtgccccgc
ctgctggccgatgtggtgtgcagcaagggcacctatgtgcgtgccctggctagggatctg
ggccgggccttgggcgtgcccgccctcctgggggcgctggtgcgtacggcccagggcgcc
ttccgcctggagcaggccgtgaccctggaagctctggccgcggcggcaggggaggggcgt
gaccaggcggccggggccatccccggggaaggagaacgtcctgccggggccggcgcccat
ggtcccatcgtgccgccggcccaggcccttgccttcctgccggcctgggtgctggatccg
gccgaggcacggcgggtggtccagggcgggcgcccccgggcgcgcagccggccgtgggat
cggccgccggaggctggcatggccatggcgggggacgccggcaccgggggaggcgccgcg
accggcgccccggccgggacccccgttccccggccggaaggcggcagggccgaggccgcg
ccgccggtgacgccgctcccccaggggaccgcgacccctccggtcccccgggttccgccg
gttccggccggggccgggacccggcgggcaccgggggcgggcggcggggcggcagcaggc
cgggtgcgcctcctggacgaggacgggcgcctcctggcggtggcccggctccagcgggct
ggaccgggctgggcggctgtgccggaaaaggttttccctccggagctccggtag
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