Thermaerobacter sp. PB12/4term: DYI95_005100
Help
Entry
DYI95_005100 CDS
T06418
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYI95_005100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thep03019
]
DYI95_005100
03016 Transfer RNA biogenesis [BR:
thep03016
]
DYI95_005100
Enzymes [BR:
thep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DYI95_005100
Messenger RNA biogenesis [BR:
thep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DYI95_005100
Transfer RNA biogenesis [BR:
thep03016
]
Prokaryotic type
tRNA degradation factors
DYI95_005100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
Carbam_trans_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
QIA26976
UniProt:
A0A8T8D751
LinkDB
All DBs
Position
1238878..1241157
Genome browser
AA seq
759 aa
AA seq
DB search
MTVEIQTGDGKKVFRTELAGRPLVVEIGQLAQQANGSALVRYGDTVILATATASREPRQG
IDFFPLRVDWEERLYAAGRIPGSFFRREGKPSERAILSGRLTDRPLRPLFPKGYRNDVQI
IVTTLSYDDDCSPEIAGIIGASVALGISDIPWNGPVGAVEVGLLDGELVINPTAAQREHS
RLDLTVAGTRDAINMVEAGAYEVPEATILDAIFRGHEEIRRLVEFQEAIIAQCGKPKAEP
VLYEPDPNVAVAVRTRYTERLRAAINHPDKQAREQAVDEVKKTALEELLAEFPEAELDIK
HVLDDVLKEIVRRQILDEGIRPDGRRPDEIRPIHVEVGLLPRAHGSGLFQRGQTQVLTVA
SLGAPGDRQMLDTLGQIEEFKRYMHHYNFPPYSTGEVAPLRAPSRREIGHGALAERALVP
VLPDELDFPYTIRLVSEVLSSNGSTSMASTCGSTLALMDAGVPIKAPVAGVAMGLIKEGD
RFAVLTDIQGIEDHLGDMDFKVAGTREGVTAIQMDIKIAGVDRAVLETALEQARAGRLFI
LEKMLAVIDKPRPELSPYAPRIIIMQIPVEKIREVIGPGGRMVNRIADECGVKIDIEDDG
KVYIAAQTQQGGQKAKEWIEQIVADVEVGSVYLGKVTRLMTFGAFVEILPGKEGLVHVSR
LAPQRVPKVEDMVRPGDTVLVKVVEIDDLGRVNLSRKDAIEEQPEKKHMEQLSGPRAHDF
DEPVAVAGPGERRGPAGRNGRPGGGPGGGMGGPRGRRRR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttgacagtagagatccagacaggcgacgggaagaaggtcttccgtaccgaactggcgggc
cggccgctggtggtggagatcggccagctggcccagcaggccaacggcagtgcgctggtc
cgctacggcgacaccgtcatcctggccacggccacggcgtccagggagccgcgccagggc
atcgacttctttcccctgcgggtggactgggaggagcggctgtacgcggcggggcgcatc
cccggttccttcttccgccgcgaaggcaagcccagcgagcgcgccatcctttcagggcgg
ctgacggaccggcccttgcggccgctgttccccaaggggtaccgcaacgacgtgcagatc
atcgtcaccaccctctcctacgacgatgactgctccccggagatcgccggcatcatcggc
gcctcggtggccctggggatctccgacatcccgtggaacgggccggtgggggccgtggag
gtgggcttgctggacggcgagctggtgatcaaccccaccgccgcccagcgggaacacagc
cgccttgacctgacggtggcgggcaccagggacgccatcaacatggtggaagccggcgcc
tacgaggtgcccgaggcgaccatcctggatgccatcttccgcggccacgaggagatccgg
cgcctggtggagttccaggaggccatcatcgcccagtgcggcaagcccaaggccgagccc
gtgctctacgagcccgaccccaacgtggcggtggcggtgcgcacccggtacaccgagcgg
ttgcgggcggccatcaaccatccggacaagcaggcccgggaacaggccgtggacgaggtc
aagaagaccgccctggaggagctgctggccgagtttcccgaggccgagctggacatcaag
cacgtgctggatgacgtcctcaaggagatcgtgcggcgccagatcctggacgaggggatc
cggcccgacggccgccgccccgacgagatccggcccatccacgtggaggtggggcttctg
ccccgggcccacggctcgggcctgttccagcggggccagacccaggtgctgacggtggcc
tccctgggcgccccgggcgaccggcagatgctggacaccctgggccagatcgaggagttc
aagcgctacatgcaccactacaacttcccgccctacagcacgggggaggtggcgcccctg
cgggcgcccagccggcgggagatcggccacggcgctctggccgagcgcgccctagtgccg
gttcttcccgacgagctggactttccctacaccatccgcctggtgtccgaagtgctgagc
tccaacgggtccacctccatggccagcacctgcggcagcaccctggccctgatggacgca
ggcgtgcccatcaaggcgccggtggccggcgtggccatgggcctgatcaaggagggcgac
cgcttcgccgtcctgacggacatccagggcatcgaagaccatctgggcgacatggacttc
aaggtggccggcacccgggagggcgtcacggcgatccagatggacatcaagatcgccggc
gtggaccgggcggtgctggagacggccctggagcaggcgcgggcagggcggctgttcatc
ctggagaagatgctggccgtcatcgacaagccgcgaccggaactgtcgccctacgcgccg
cggatcatcatcatgcagatcccggtggaaaagatccgcgaggtcatcggccccggcggc
cgcatggtgaaccgcatcgccgacgagtgcggggtcaagatcgacatcgaggacgacggc
aaggtctatatcgcggcccagacccagcagggtgggcagaaggcgaaggagtggatcgag
cagatcgtcgccgacgtggaggtgggcagcgtctacctgggcaaggtgacgcggctcatg
accttcggcgccttcgtcgagatcctgccgggcaaggaggggctggtccacgtctcgcgc
ctggcgccgcagcgggtgcccaaggtggaggacatggtccgtcccggcgatacggtgctg
gtcaaggtggtggagatcgacgacctgggacgggtcaacctctcgcgcaaggacgccatc
gaggaacagcccgagaagaagcacatggaacagctcagcggcccgcgggcccacgacttc
gacgagccggtggccgtggccgggccgggcgagcggcgaggtcctgccggccgcaacggg
cggcccggaggcgggccggggggcggcatgggcggcccccgcgggcgccggcgccggtga
DBGET
integrated database retrieval system
