Thermaerobacter sp. PB12/4term: DYI95_005285
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Entry
DYI95_005285 CDS
T06418
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
thep
Thermaerobacter sp. PB12/4term
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thep03016
]
DYI95_005285 (thpR)
Enzymes [BR:
thep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DYI95_005285 (thpR)
Transfer RNA biogenesis [BR:
thep03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DYI95_005285 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QIA27010
UniProt:
A0A8T8D956
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All DBs
Position
1286574..1287221
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AA seq
215 aa
AA seq
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MPARTAAGGDGEDHWRLFIAVPVTGPVAGALQAWMAAARRQRPGLKWVRPGDLHITLRFL
GNRPVASIPSLVAAGAKAAREAAPLDVEVRGVGGFPAAGRARTLWAGVGEGAAGLAALAA
SLETQLLAVAPDLDPVHQPFQAHITLARVRGGWIDLDRWPHAVAVREQDWGRLPVRAMVL
FRSQLHPGGPVYTPLHRWPLGEAAAAGLDEPPAPR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccgcaccgcggccggtggggacggcgaagaccactggcggctgttcatcgcc
gtgcccgtgacgggcccggtggccggggcgctgcaggcctggatggccgcggcccgccgc
cagcggcccgggctcaagtgggtccgtcccggggacctgcacatcaccttgcggtttctg
gggaaccgccccgtggccagcattccctccctggtggcagccggggcgaaggcggcgcgg
gaggcggccccgctggacgtggaggtgcgaggggtcggcggctttcccgctgccggccgg
gcccgcacgttgtgggccggagtgggcgagggagccgccgggctggccgccctggcggcc
agcctggagacgcagctgctggcggtggcgcccgacctggatccggtgcaccagcccttc
caggcccacatcaccctggcccgggtccgtggcggctggatcgacctcgaccgctggccc
catgccgtggcggtgcgggaacaggactggggccggcttcccgtgcgggccatggtcctg
ttccgcagccagttgcatcctggcgggccggtgtacacgccgctgcaccgctggcccctg
ggggaggcggcggccgccggccttgacgagccccctgccccacggtaa
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