Thermaerobacter sp. PB12/4term: DYI95_005300
Help
Entry
DYI95_005300 CDS
T06418
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYI95_005300 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thep03019
]
DYI95_005300 (rny)
Messenger RNA biogenesis [BR:
thep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DYI95_005300 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
Propep_M14
DUF5662
KH_2
DUF6187
Motif
Other DBs
NCBI-ProteinID:
QIA27013
UniProt:
A0A8T8D8V2
LinkDB
All DBs
Position
1289600..1291144
Genome browser
AA seq
514 aa
AA seq
DB search
MVSTAIVVLIVLVTVVIAGAAGYVIRKLVAESRIGSAEALARQLVEEGRKEGEARKREAL
LEAKEEVHRLRTDFERETRERRQELQQLERRLLQREEALDRRARQLDEREELMRARERDL
DRAEELVEELRLRQMTELERIAGLSREEAREYLLAQVQQEMRHDLAVMIREMEEEARAEA
DRRAREIIATAVQRLAAEYVPELTVSVVELPGDEMKGRIIGREGRNIRHFEALTGVDLII
DDTPEAVVISCFDPIRREIARMTLEKLIADGRIHPAKIEEMYAKAVQEMDQRIQEEGERA
CYEVGVHNLHPELVKLLGRLAFRTSYGQNILQHSIEVAHLCGLMAYELGADVNVARRAGL
LHDIGKALDHEMEGTHLTIGMEILQKYHESEEVIHAMSCHHGDFEPRTIEAVIVTAADAL
SAARPGARRETLEAYIRRLRQLEEIASSFEGVAKAYAIQAGREVRIMVHPDKVDDAEAYL
LARQIAKRIEQELQYPGQIKVTLIRETRVTEYAR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgacagccatcgtcgtcctgatcgtgctcgtcaccgttgtcatcgccggggcg
gcgggctacgtgatccggaagctggtggccgaaagccggatcgggtctgccgaggctctg
gcccgacagctggtggaggaagggcgtaaggaaggcgaggcgcgcaagcgcgaggccctg
ctggaggcgaaggaagaggtccacaggctgcggaccgacttcgagcgcgaaacccgggag
cggcgccaggaactgcagcagctggagcgccgcctcctccagcgggaggaggcgctggac
cgccgggcccggcagctggacgagcgggaagagctcatgcgggcccgggagcgggacctg
gaccgggcggaggagctggtggaagagctccgcttgcgccagatgacggagctggagcgc
atcgccgggctgagccgggaggaggcgcgggagtacctgctggctcaggtccagcaggaa
atgcgccatgacctggccgtgatgatccgcgagatggaggaagaagcccgggcggaagcc
gaccggcgggcccgggagatcatcgccaccgccgtccagcgcctggcggcggagtacgtg
ccggagctgaccgtctcggtggtggagctgccgggagatgagatgaaggggcggatcatc
ggccgggagggccgcaacatccgccactttgaggcactgaccggcgtcgacctgatcatc
gacgacacgccggaagccgtggtgatctcctgcttcgaccccatccggcgggagatcgca
cggatgaccctggagaagctcatcgccgacggccgcatccaccccgccaagatcgaggag
atgtacgccaaggccgtgcaggagatggaccagcgcatccaggaggaaggcgagcgcgcc
tgttacgaggtgggcgtgcacaacctgcaccccgagctggtcaagctcctcgggcggctg
gcctttcgcaccagctacggccagaacatcctgcagcactccatcgaggtggctcacctg
tgcggcctgatggcgtatgaactgggggccgacgtcaacgtggcccggcgcgccggcttg
ctgcacgacatcggcaaggccctggaccacgagatggagggcacccacctgaccattggc
atggagatcctgcagaagtatcatgagtccgaagaggtcatccatgccatgtcctgccat
cacggcgacttcgagcccaggaccatcgaggccgtgatcgtgacggcggccgacgccctg
tcggcggcccggccgggtgcccggcgggaaaccctggaggcttacatccggcggttgcgg
cagctggaggagatcgccagcagcttcgaaggcgtcgccaaggcctacgccatccaggcc
gggcgcgaggtccggatcatggtccacccggacaaggtggatgacgccgaggcctacctg
ctggcgcggcagatcgccaagcggatcgagcaggagctgcagtacccgggccagatcaag
gtgacgctgatccgggagacgagggtgacggagtacgcgcgttga
DBGET
integrated database retrieval system