KEGG   Thermaerobacter sp. PB12/4term: DYI95_005300
Entry
DYI95_005300      CDS       T06418                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
thep  Thermaerobacter sp. PB12/4term
Pathway
thep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DYI95_005300 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thep03019]
    DYI95_005300 (rny)
Messenger RNA biogenesis [BR:thep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DYI95_005300 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD Propep_M14 DUF5662 KH_2 DUF6187
Other DBs
NCBI-ProteinID: QIA27013
UniProt: A0A8T8D8V2
LinkDB
Position
1289600..1291144
AA seq 514 aa
MVSTAIVVLIVLVTVVIAGAAGYVIRKLVAESRIGSAEALARQLVEEGRKEGEARKREAL
LEAKEEVHRLRTDFERETRERRQELQQLERRLLQREEALDRRARQLDEREELMRARERDL
DRAEELVEELRLRQMTELERIAGLSREEAREYLLAQVQQEMRHDLAVMIREMEEEARAEA
DRRAREIIATAVQRLAAEYVPELTVSVVELPGDEMKGRIIGREGRNIRHFEALTGVDLII
DDTPEAVVISCFDPIRREIARMTLEKLIADGRIHPAKIEEMYAKAVQEMDQRIQEEGERA
CYEVGVHNLHPELVKLLGRLAFRTSYGQNILQHSIEVAHLCGLMAYELGADVNVARRAGL
LHDIGKALDHEMEGTHLTIGMEILQKYHESEEVIHAMSCHHGDFEPRTIEAVIVTAADAL
SAARPGARRETLEAYIRRLRQLEEIASSFEGVAKAYAIQAGREVRIMVHPDKVDDAEAYL
LARQIAKRIEQELQYPGQIKVTLIRETRVTEYAR
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggtgtcgacagccatcgtcgtcctgatcgtgctcgtcaccgttgtcatcgccggggcg
gcgggctacgtgatccggaagctggtggccgaaagccggatcgggtctgccgaggctctg
gcccgacagctggtggaggaagggcgtaaggaaggcgaggcgcgcaagcgcgaggccctg
ctggaggcgaaggaagaggtccacaggctgcggaccgacttcgagcgcgaaacccgggag
cggcgccaggaactgcagcagctggagcgccgcctcctccagcgggaggaggcgctggac
cgccgggcccggcagctggacgagcgggaagagctcatgcgggcccgggagcgggacctg
gaccgggcggaggagctggtggaagagctccgcttgcgccagatgacggagctggagcgc
atcgccgggctgagccgggaggaggcgcgggagtacctgctggctcaggtccagcaggaa
atgcgccatgacctggccgtgatgatccgcgagatggaggaagaagcccgggcggaagcc
gaccggcgggcccgggagatcatcgccaccgccgtccagcgcctggcggcggagtacgtg
ccggagctgaccgtctcggtggtggagctgccgggagatgagatgaaggggcggatcatc
ggccgggagggccgcaacatccgccactttgaggcactgaccggcgtcgacctgatcatc
gacgacacgccggaagccgtggtgatctcctgcttcgaccccatccggcgggagatcgca
cggatgaccctggagaagctcatcgccgacggccgcatccaccccgccaagatcgaggag
atgtacgccaaggccgtgcaggagatggaccagcgcatccaggaggaaggcgagcgcgcc
tgttacgaggtgggcgtgcacaacctgcaccccgagctggtcaagctcctcgggcggctg
gcctttcgcaccagctacggccagaacatcctgcagcactccatcgaggtggctcacctg
tgcggcctgatggcgtatgaactgggggccgacgtcaacgtggcccggcgcgccggcttg
ctgcacgacatcggcaaggccctggaccacgagatggagggcacccacctgaccattggc
atggagatcctgcagaagtatcatgagtccgaagaggtcatccatgccatgtcctgccat
cacggcgacttcgagcccaggaccatcgaggccgtgatcgtgacggcggccgacgccctg
tcggcggcccggccgggtgcccggcgggaaaccctggaggcttacatccggcggttgcgg
cagctggaggagatcgccagcagcttcgaaggcgtcgccaaggcctacgccatccaggcc
gggcgcgaggtccggatcatggtccacccggacaaggtggatgacgccgaggcctacctg
ctggcgcggcagatcgccaagcggatcgagcaggagctgcagtacccgggccagatcaag
gtgacgctgatccgggagacgagggtgacggagtacgcgcgttga

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