Thermaerobacter sp. PB12/4term: DYI95_005535
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Entry
DYI95_005535 CDS
T06418
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep00900
Terpenoid backbone biosynthesis
thep01100
Metabolic pathways
thep01110
Biosynthesis of secondary metabolites
thep03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DYI95_005535 (rpsA)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
DYI95_005535 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
thep03011
]
DYI95_005535 (rpsA)
Enzymes [BR:
thep01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
DYI95_005535 (rpsA)
Ribosome [BR:
thep03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
DYI95_005535 (rpsA)
Bacteria
DYI95_005535 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
OB_RRP5_4th
S1_2
RNase_II_C_S1
DUF5335
DUF2110
S1_RRP4
Motif
Other DBs
NCBI-ProteinID:
QIA28228
LinkDB
All DBs
Position
complement(1348572..1350248)
Genome browser
AA seq
558 aa
AA seq
DB search
MDQIRDPQAADREGTPGAAPEQEVTPASPEPHLSPAAVEAAAGATEALAQLKQEAEESAE
AAAEREAGVAETEGADRPAGQPEGEPGDARSPGEAPAAAAGEPGGAVPETPGPQGDGAGG
TPAAAAGEGPAAAGDGDREAATSPAGGPAAETAGAARGTMDEQLAPTRLSRGQVVTGTVV
QVADDHVLVDVGHKSDGTIPRNELRLLGGKQPEEVYQVGQEIPVVVLGFTDKGEGGLLLS
HRRAVEREAWDALRRAYEAGEPIEVPVVEQVKGGLVCDAGVRAFMPASHVERGYVADLSH
YVGTTVRAKIIEFDRNKRRVILSRKELLEEEARRRAEETLASLEEGQVRTGVVKGLTDFG
AFIDLGGVDGLLHVSEMHWGRIDHPRDLLKEGDTIQVKVLKVDRERGRISLSLKELMPDP
WSDVERRYPVGATVKGTVVRLVPFGAFVRLEPGVEGLVHISQLADHRVESPDEVVHEGQE
VEVRVLRVQPEERRISLSMRSPAEPRRPRTERPRRSPERPQSQAQESTPAGDAGGITIGE
MFGDLLEETRDRLAGEGE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaccagatccgcgatccacaggcggcggaccgggaagggactcccggcgccgcgccg
gaacaggaggtgacgcccgccagcccggagccgcacctgagcccggcggcggtagaggcc
gccgcgggggcgacggaagccctggcgcagctgaagcaggaggccgaggaatccgccgag
gccgccgctgagcgggaggccggcgtggccgagaccgaaggcgccgaccggccggcgggc
cagcccgagggcgagcccggcgacgcccggtcgccgggggaggcgcccgccgctgcagcc
ggcgagccgggcggtgccgtccccgaaaccccgggtccccagggcgacggcgctggtgga
acgccagccgccgcggcaggggaagggccggccgcagccggcgacggagaccgggaggcg
gcgacctcacccgccgggggtccggctgcggaaacggctggagcggcccgcggaaccatg
gatgagcagctggcgccaacccgcctgagccgcgggcaggtggtgacgggcacggtagtg
caggtggccgacgatcacgtcctggtggacgtgggtcacaagtccgacggcacgatcccc
cggaacgagctgcggctgctgggcggcaagcaacccgaagaggtctaccaggtgggccag
gagatccccgtggtcgtcctgggcttcaccgacaagggtgaagggggcctgctgctctcc
caccggcgggcggtggagcgggaggcctgggacgccctgcggcgggcttacgaggccggc
gagcccatcgaggtgccggtggtcgaacaggtgaagggcggcctggtctgcgacgccggg
gtccgcgccttcatgcccgcctcccacgtggagcgaggctacgtggccgacctcagccat
tacgtgggcaccacggtgcgggccaagatcatcgaattcgaccgcaacaagcggcgggtg
atcctctcccgcaaggagctgctggaggaggaagcccggcgccgggcggaggaaaccctg
gccagcctggaggaaggccaggtgcgcaccggcgtggtcaagggcctcaccgacttcggc
gccttcatcgacctgggcggggtggatgggctgctccacgtctcggagatgcactggggc
cgcatcgaccatccccgggacctgctgaaggaaggcgacaccatccaggtcaaggtgctc
aaggtcgaccgggagcggggccgcatctccctcagcctgaaggaactcatgcccgacccc
tggagcgacgtggagcggcgctaccccgtgggggcgacggtcaagggcactgtggtccgc
ctggtccccttcggcgccttcgtgcggctggagcccggggtggaaggcctggtccacatc
tcccagctggccgaccaccgggtggagtcgcccgacgaggtggtccacgagggtcaggaa
gtggaggtgcgggtgctgcgggtccagccggaggagcggcgcatcagcctgagcatgcgc
tcgccggccgagccgcggcggccccggaccgagcggccgcggcggtcacccgaacgtccc
cagtcccaggcgcaggaatcgaccccggctggtgacgcgggcgggatcaccatcggcgag
atgttcggcgatctgctggaggagacccgcgaccggctggcaggcgaaggggaatga
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