Thermaerobacter sp. PB12/4term: DYI95_011035
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Entry
DYI95_011035 CDS
T06418
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thep
Thermaerobacter sp. PB12/4term
Pathway
thep00550
Peptidoglycan biosynthesis
thep01100
Metabolic pathways
thep01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DYI95_011035 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DYI95_011035 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thep01011
]
DYI95_011035 (mrdA)
Enzymes [BR:
thep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DYI95_011035 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thep01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DYI95_011035 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QIA27975
UniProt:
A0A8T8DA93
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All DBs
Position
complement(2648453..2650507)
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AA seq
684 aa
AA seq
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MNPEELARRQRLRRRNILMGLLVAWTVILLGRLYMLQVVMGDELSEYAAGQRLRKVYVPA
PRGQILDRRGQVLATNLPAYSAYLVYTREGLDPEARRLLSRILDIPVEAIEEAEAELRVR
PVPEIPVRLKAELTPAEITALAENRDRLPGVVVEPQPLRYYPGSTLAAHVLGYVREGNRP
WELKGESGIEATYNGPVQLPDGRTVRGLTGVDGQRLVEVDARGRPLSDESRHLLLGGDAD
RYAVPPKPGSTLVLTLDARVQKAAEEALARRIQELRELKTRPCPCPARNGAAVAIDVRTG
AILAMTSYPTFDPNDFARQAFMEPSDPRYDAVNRKVYQYVHWNERYRGKRVEGPTRNLAI
ADALPPGSTFKPITGLAAMLRGVLPASAYCGGEFYFAGRAWQDWGVHGHVDFDKAIGRSC
NVYFYQTGLNAGIDAIADVATQFGLGQLTGLRDLAGEVQGSLATPAVKAELVARADPNST
ESERRWYAGDTLNASIGQGFHAFTPLQMAVYTAALANGGTRYRPYLVQEIRDPQTGRVLW
EAKPDPLNTVDVPTAFLEKVREAMVTVTQDNGGWYGTAYGVFRDAPYVAAGKTGTAQGGT
RDPEYENHGWFIAFAPAGPGEQPEIAVAVVVRAGGGGSLAAGPVARAMLDAYFAGRYGLP
ANPETAAEEAHEDAARSAAVVPSD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggaagaactggcccgccggcagcgcctgcgccggcgcaacatcctgatggga
ctgctggtggcctggacggtgatcctgctgggccgcctgtacatgctgcaggtggtcatg
ggcgacgagctcagcgagtacgccgctggccagcggctgcgcaaggtgtacgtgcccgca
ccgcgggggcagatcctggaccggcgcggccaggtcctggccacaaacctgcctgcctat
tccgcctacctggtctacacccgggagggccttgacccggaggcgcgccggctgctgagc
cggatcctcgacattcccgtcgaggccatcgaggaggcggaggccgaactgcgtgtccgg
ccggtgccggagatccccgtgcgcctcaaggcggagctcactccggcggagatcaccgcc
ctggcggagaaccgcgaccgcttgcccggggtggtggtcgagccccagcccctgcgctac
tacccgggcagcaccctggcggcccacgtgctgggctatgtgcgtgaggggaaccgcccg
tgggagctaaaaggggagtcaggcatcgaagccacctacaacggcccggtgcagctgccc
gacgggcggacggtgcgcggcctgacgggggttgacggccagcggctggtggaggtggac
gcccgcggccggcccctcagcgacgaatcccgccacctgctgctgggcggcgatgccgac
cggtatgcggtgccgcccaagcccgggagcaccctggtgctgacgctggatgcccgggtg
cagaaggcggcggaagaggcgctggcccggcggattcaggaactgcgggaactgaagacg
aggccgtgcccctgcccggcccgcaacggtgccgccgtggccatcgacgtgcggaccggg
gccatcctggccatgacctcttatccgacctttgaccccaacgatttcgcccgccaggct
ttcatggagcccagcgacccgcgctacgatgcggtgaaccgcaaggtttaccagtacgtc
cattggaacgagcggtaccgcggcaagcgggtcgaggggccaacacggaacctggccatc
gccgacgccttgccgccgggctccactttcaagcccatcacggggctggcggccatgctg
cgcggtgtcctgcccgcctccgcctactgcggcggtgagttctattttgccggccgggcc
tggcaggactggggtgtccacggtcacgtcgactttgacaaggcgatcgggcgctcatgc
aacgtttacttctaccagacgggtctcaacgccgggatcgacgccatcgccgacgtcgcc
acgcagttcgggctcggacagttgaccggtctccgggacctggccggggaggttcagggt
tcgctggccacgccggcagtgaaggccgagctggtggctcgtgccgacccgaacagcacc
gaatccgagcgccgctggtacgccggggataccctgaatgcctccatcggccaggggttc
catgccttcacgcccctgcagatggccgtctacaccgccgccctggccaacggcggcacc
cgctaccgcccgtacctggtccaggagatccgggatccgcagacgggccgggtgctgtgg
gaagcgaagcccgacccgctgaacacggtggacgttccgacggcgttcctggaaaaggtg
cgggaagccatggtgacagtgacccaggacaacggcggctggtacggcacagcctacggt
gtgttccgggacgcgccctacgtagccgcgggcaagacgggcacggcccagggaggtacc
cgcgatcccgagtacgaaaaccacggctggttcatcgccttcgcacccgcgggcccgggc
gagcaacctgagatcgccgtggccgtcgtcgtccgggccggtggcggcggctcgctggcc
gccggtccggtggcccgcgccatgctggacgcctactttgccggccggtacgggctgccg
gccaatcccgagacggctgcggaagaggcccacgaagacgcggcccgcagcgcggcggtg
gtcccttccgactga
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