Thermosipho sp. 1070: Y592_01130
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Entry
Y592_01130 CDS
T04909
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ther
Thermosipho sp. 1070
Pathway
ther03030
DNA replication
ther03410
Base excision repair
ther03420
Nucleotide excision repair
ther03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Y592_01130
03410 Base excision repair
Y592_01130
03420 Nucleotide excision repair
Y592_01130
03440 Homologous recombination
Y592_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ther03032
]
Y592_01130
03400 DNA repair and recombination proteins [BR:
ther03400
]
Y592_01130
Enzymes [BR:
ther01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Y592_01130
DNA replication proteins [BR:
ther03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Y592_01130
DNA repair and recombination proteins [BR:
ther03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Y592_01130
NER (nucleotide excision repair)
GGR (global genome repair) factors
Y592_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-ProteinID:
ANQ53139
LinkDB
All DBs
Position
complement(224583..227249)
Genome browser
AA seq
888 aa
AA seq
DB search
MANLFLFDGTGLVYRAFYAIDQSLKTSTGKHTNAVYGIAKMLIKFFKEHININKDACAFV
LDSKGGSQKRKELLIEYKANRPETPKLIIEQLPYIEEFVESFGLRVLKLMGYEADDIIAT
LAKKFYDDFEQINIITGDKDLLQLVDDKIFVWRIERGITDLVLYDKSKVYEKYGIYPYQF
ADYLSLVGDQIDNIPGVKGIGKKTATSLLKKYGSLDNVIKNKKLLTNKLQKLLENSKENL
TLSRELVELIYDVPLNLKAEDLIYKGYNQKKLLQVLKNFEFSSIVKELNLQEEFEKEYIV
VDNLKKLEKLQDEIKKMKVFSIDTETTSLEPYSAKLVGISVATKEGKAYYIPVSHVNGKN
FEKKYVLKFLKEILESGEFNIVGQNLKFDYKIFKLFGIDPHPPYFDTMVAAYLLNPDERK
YNLEELSLKFLGYKMISFDELVDGSVPLFGNDFSFVPIEKAAEYSCEDADITFRLFHILS
KHISEIKDLFYNIEMPLINVLAQMELNGVYFDLDYLKILSEKYEQRMRRLEEKIYEISGE
RFNINSSKQVAEVLFNKLKLPSIKKTSTGRDSTNAEVLEELAKEYEIAQLLLEHRKYQKL
KSTYIDSIPNSVNDITKRVHSSFHQTGTATGRLSSSEPNLQNLPTRTEEGREIRKAVKPQ
FEDWYIVGADYSQIELRILAHMSGDEKLLEAFKNNYDIHTITAANIFNISELMVTEDMRR
MGKMVNFAIIYGISPYGLSKRIGLNVNETKKIIDSYFKYYNGVFDFIKQTVEFAKKNGFV
KTLFGRKRYIPQLRSKNVRQEGERIAINTPIQGTAADIIKIAMINIHNELLRRKLKTKMI
LQVHDELVFEVPKEELEIVKEIIVDKMENSVKLKVPLKVDLYEGKEWE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctgtttctctttgatggtacaggtttagtttatagggcgttttatgcaata
gatcaatctttaaagacttctacaggaaagcatacaaatgcagtatacggaattgcaaag
atgttaataaagttttttaaagagcatatcaatattaataaagatgcttgtgcttttgtt
ttagattcaaaaggaggaagtcagaaaagaaaagaacttttgattgaatacaaagcaaat
aggcctgaaacccccaagcttataattgaacaacttccgtatatagaggaatttgtggaa
agttttgggttaagagtgttaaaattaatgggatacgaagcggatgatattatcgcaaca
cttgcaaaaaaattttacgatgattttgaacagataaatataataacaggtgacaaagat
ttattgcagcttgttgatgataagatctttgtttggcggatagaaaggggaattacagat
ttagttttatacgataaaagcaaagtgtatgaaaagtacgggatttatccgtatcaattt
gcagattatctttctcttgttggagatcaaattgataatattccaggtgttaagggaata
ggaaaaaagactgccacatctttgttgaaaaaatatggttctttggacaatgttataaaa
aataaaaagttacttaccaataagctacaaaaattacttgaaaattcaaaggaaaattta
acattaagtagagaattggttgaactaatatacgacgtgcccttgaatttaaaagcagag
gatttgatatataaggggtataatcaaaaaaaacttttacaagttttgaaaaattttgaa
ttttcttcgatagttaaagaacttaatttgcaagaggaatttgaaaaggaatatattgta
gtggataatttaaaaaaacttgaaaaactacaagatgagataaagaaaatgaaagttttt
tccattgatacagaaacaacttcacttgaaccatatagtgcaaaacttgtagggatatct
gttgctacaaaggaaggtaaagcatactatatccccgtttcacatgtcaatggaaaaaat
tttgaaaaaaagtatgtattaaagtttttaaaggaaattttggaaagtggagagtttaat
atagtgggtcagaatttaaagtttgattataagatttttaaactttttggaattgatccc
catcccccatattttgatacaatggttgctgcgtatcttttaaatcctgatgaaagaaag
tacaatcttgaagagttatctttaaagtttttggggtataaaatgataagctttgacgaa
ttagtagatggtagtgttcccttatttgggaatgatttttcatttgttccaattgaaaaa
gctgcagagtattcttgcgaagatgcagatattacatttagattgtttcatatattgagt
aaacatatatcagaaataaaagatttgttctacaacatagaaatgccacttataaatgta
cttgctcaaatggaattaaatggagtgtattttgatttggattatttgaaaatattatcc
gaaaaatatgaacagaggatgagaagattagaagaaaaaatctatgagatttccggtgag
cgttttaatattaattcttctaagcaagttgcagaagtgttgtttaataaacttaaactt
ccatctattaaaaagacctcaacgggtagagattcaacaaatgcagaggttttagaagaa
cttgccaaggaatatgaaattgcgcaattgttactggaacatagaaaatatcaaaagctt
aagagtacctatattgattcaataccaaattctgttaatgatattacaaagagagtacat
agtagctttcatcaaacgggaactgcaacaggtagattgagcagttcagagcctaatctt
caaaatttacccacaaggactgaagaaggcagagaaattaggaaagctgttaagcctcaa
tttgaagactggtatatagtcggagcggattattcacaaattgaattgagaattttagcc
cacatgagtggggatgaaaaattacttgaagcatttaaaaataattatgatatccatacc
attaccgctgcaaatatctttaatatatctgaattaatggtaacagaagatatgagaaga
atgggaaaaatggtaaattttgcgataatatacggtatttcaccgtatggcttgtcaaag
agaataggattgaatgtaaatgagacaaaaaagataatagatagttattttaaatattac
aatggtgtttttgattttattaaacagacagtggaatttgcaaaaaagaatgggtttgta
aagactttgtttggaagaaaaagatatattccacagctaaggtcaaaaaatgttcgccaa
gaaggtgaaagaatagcgataaatacaccgattcaaggcacagcagcagatatcataaag
attgcaatgattaatatacataatgaacttttgaggagaaaattaaaaacaaagatgatt
ttgcaagttcacgacgaattagtctttgaagttccaaaggaggaattggaaatagtaaaa
gaaataatagtagacaaaatggagaattctgttaagttaaaagtcccattaaaagtagac
ttatacgaaggaaaagagtgggaatag
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