Thermosipho sp. 1070: Y592_04605
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Entry
Y592_04605 CDS
T04909
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ther
Thermosipho sp. 1070
Pathway
ther03420
Nucleotide excision repair
ther03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Y592_04605
03430 Mismatch repair
Y592_04605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ther03400
]
Y592_04605
Enzymes [BR:
ther01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Y592_04605
DNA repair and recombination proteins [BR:
ther03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Y592_04605
MMR (mismatch excision repair)
Other MMR factors
Y592_04605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
DEAD
ResIII
Pre_tape_measure
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ANQ53713
LinkDB
All DBs
Position
907775..909658
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AA seq
627 aa
AA seq
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MFEKELDEEQYEAVTKSQGKTLVIAGPGSGKTRVITYKIAYLINSGVKPQEIMLVTFTKA
AAKEMLQRAKIVSKSNLEGITAGTFHHVCNLFLRRYGSTIGLKPNFTILDSEDAKDLMES
IRSQLIPKSERKTVPTAKQLLSIYSYMNNTLSSLKEAITRYNPRFLEQEHTIEQILIKYQ
QEKQAQNSVDYDDLLIHTLHILSTSKSIRLRESERYKWILVDEFQDTNIVQFKIVELLST
VHKNLIVVGDDAQSIYSFRGARFENVLDFQKEAETFKIQTNYRSSQEIVNFINEMLPKKS
IKKTLCAKRSTGIKPFLVQVFDHYDEADFVANEIVNFQHNGISLNDIAVLYRAHAHSLEL
QLELSKHNIPFKLYSGLRLTETAHVKDCMAFLKTTVNPEEKISWIRLLKLVNGIGNIKAN
NYAEEISKIGYSALDKIKEKSSDFKKLRETIKNTLTVENPGERIKIFYIDFYHKKMEEKF
EDYKDRREDIERLIEMASFYKNTENFIGDILISESYEMRNEDNEKEKVTLTTIHQAKGLE
WKVVFILSVNPGDFPHIMSLRENNIDEEERLFYVAITRAKDYLYIIHSIGGSSRIFYGND
YLIRRGKSFIDEIPFHLVEHLEYGVEK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaagaacttgatgaagaacaatatgaagcggtaacaaaatcacaagggaaa
acattagtaatagcaggacctggcagtggtaaaacaagggtaattacatacaaaatagca
taccttataaactccggtgtaaaaccacaggagataatgcttgttacatttacaaaagca
gctgcaaaagaaatgctacaaagggctaaaatagtttcaaaatcaaatctagaaggtatt
acggcaggtacgttccatcatgtatgtaacctatttcttagaagatatggaagtacaatt
ggactaaaaccaaactttaccatcctagatagtgaggatgcaaaagatttaatggaaagc
attagaagtcaattaataccaaagtctgaaagaaaaacagtaccaactgcaaagcaactg
ctctcaatatattcatatatgaacaatacactttcatcgctaaaagaagcaataacaaga
tacaatccaagatttctagaacaagaacatacaatagaacaaatattaataaaataccaa
caagaaaaacaagctcaaaattctgtagattatgatgaccttttaatccatacactccac
atactttcaacaagcaaaagcatcagattaagagaatcggaaagatacaagtggatactc
gttgatgaatttcaagacaccaatatagtacaatttaaaatagtagaactactatcaact
gtacataagaacctaatagttgttggagacgatgcacaaagcatttattcatttagaggt
gcaaggtttgaaaatgtactcgatttccaaaaagaagcagaaacattcaaaatccaaaca
aattacagaagttcacaagaaatagtcaattttataaacgaaatgctcccaaaaaaatct
ataaagaaaacattatgcgcaaaaagaagtacaggtataaaaccatttttagtacaagta
tttgaccattacgatgaagcagattttgtagcaaatgaaattgtaaactttcaacataac
ggaatatccttaaatgacattgcagtgctatacagagcacacgcacattcccttgaactt
caacttgaactttcaaaacataacattccttttaagttatactctggtttacgacttacc
gaaacagcacatgtaaaagattgcatggcatttctaaagaccacggtaaatcctgaagaa
aagatttcatggatacggctcctaaaacttgtaaatggcataggaaatataaaggcaaac
aactatgcagaagaaatttcaaaaataggatatagcgcattagacaaaataaaggaaaaa
agttccgattttaaaaaactaagggaaactattaaaaatacactaactgtagaaaatcca
ggtgaaagaataaagatattttacatagacttttatcacaaaaaaatggaggaaaaattt
gaagattacaaagatagaagagaggatatagagcgccttatagaaatggcgtcattttac
aaaaacaccgaaaactttattggtgatatattaataagtgaaagctatgaaatgagaaat
gaagacaacgaaaaagaaaaggtaacacttactactatccaccaggcaaaagggcttgaa
tggaaagtagtttttattttaagtgttaaccccggtgattttccacatataatgagtcta
cgcgaaaataacatagatgaagaagaaaggttattttatgttgcaataacacgtgcaaaa
gattatctatacataatccacagtataggtggttcatctagaatattctacggaaatgat
tatctaataagacgtggaaagagctttatagacgagataccctttcaccttgttgaacac
cttgaatatggagttgaaaaatga
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