Thermosipho sp. 1070: Y592_05175
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Entry
Y592_05175 CDS
T04909
Name
(GenBank) RNA-binding protein S4
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ther
Thermosipho sp. 1070
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ther03009
]
Y592_05175
Enzymes [BR:
ther01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Y592_05175
Ribosome biogenesis [BR:
ther03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Y592_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
bPH_1
DUF7744
Motif
Other DBs
NCBI-ProteinID:
ANQ53808
LinkDB
All DBs
Position
complement(1027690..1028382)
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AA seq
230 aa
AA seq
DB search
MRLDKFLANAKVGSRKDVKKIIKAGIVSVNGIIIKNPEFKVNYNDIIKVNDQTITPYHKV
YIIFNKPSGYTSSKSEYERNVFEFITHPYIENLHIAGRLDKDVEGLLLITNDGEFTHKVI
SPKYNVEKEYLVEINGILTVDMIKKAKKGITLKNGRSFKPAIIKKINDNLISIIITEGKY
HEVKLLLKSLGLFYNKIERIRIGSLNLYDFNLKKGDWIEIDYKTAMKALE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctagataagtttttggcaaatgcaaaagttggttctagaaaagacgtaaaaaaa
attattaaagcaggaatagtttccgtaaatggaataataatcaaaaatccagaatttaag
gtaaattacaacgatataataaaagtaaatgaccaaacaataactccataccacaaagtt
tatataatatttaacaaaccatctggatatacttcaagtaaatccgaatacgaaagaaac
gtatttgaatttatcacacatccctatattgaaaatcttcacattgcaggaagacttgat
aaagatgtagaaggattactattaataacaaatgatggtgaatttacacacaaagtaatt
tcaccaaaatataacgtagaaaaagaataccttgtggaaatcaatggtatactcacagtt
gatatgatcaaaaaagcaaaaaaaggtattaccttgaaaaacggcagatcttttaaacct
gcaataataaaaaagataaatgataatttaatatctataataattacagagggtaaatat
catgaagtaaaattactactaaaatctttaggtcttttttacaacaaaatagaacgaata
agaataggaagtctaaatctatatgattttaacttaaaaaaaggtgattggatcgaaata
gattacaaaacagctatgaaagctcttgaataa
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