Thermosipho sp. 1070: Y592_05920
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Entry
Y592_05920 CDS
T04909
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ther
Thermosipho sp. 1070
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ther03032
]
Y592_05920
03400 DNA repair and recombination proteins [BR:
ther03400
]
Y592_05920
Enzymes [BR:
ther01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Y592_05920
DNA replication proteins [BR:
ther03032
]
Prokaryotic type
DNA Topoisomerases
Y592_05920
DNA repair and recombination proteins [BR:
ther03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Y592_05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
DNA_ligase_ZBD
Zn_ribbon_recom
Toprim_4
HypA
Auto_anti-p27
Lar_restr_allev
QueF
Zn_ribbon_RPB9
DUF7351
Motif
Other DBs
NCBI-ProteinID:
ANQ53941
LinkDB
All DBs
Position
complement(1156415..1158505)
Genome browser
AA seq
696 aa
AA seq
DB search
MGKKKKVIIVESPAKAKTIEKILGEDYKVISSKGHVRDLPQKKFGVNLENFEPEFEIIPG
KEKVVEQIQREVKGKEVLIASDMDREGEAIAWHLSNILNLSGKNRIIFTEITPNTIKKSV
QSPREIDIKKVNAQLARRILDRIVGYKISPLLWKIIKGAMSAGRVQSAALKIICDRERER
FVFKPKEFYKVSIEVKKTKASLWSISGKKIKQENVTEKIANDIKENVKEVILKDIIEKER
KKSPPSPYITSTLQQDAATRLGFPVSKTMKIAQSLYEGVNTKDGQHIAFITYMRTDSTRV
SEEAKNMATDFIEKKFGNEYKGGKKTKKQKKKVQDAHECIRPVNIEITPEIAKNLLNQDE
YKLYKIIWERFLASQMKHAIYKDKTYIFQSGKYEFRTTISHRIFDGFEIIYNTKEKKENE
LNLKVGKTYNVSKVNTEKDMTKPPSRFTEATLVKKLETEGIGRPSTYATIISTLLQRKYV
IKEKKELLPTLLGFVVEDFLTKKFPEIVDKNFTATMEAELDKIETGEKQWKSVLNEFYSD
FSKYLSKAQKEFYTVNYETDLKCEDCEGTYKLKIGKFGLYLNCESCQKNKSIDNTINAVI
IENKAYINKAIENHISITVSENACPKCGGNLTRKKGKFGYYFKCDSCDFTISGYKIASGK
CPKCNSIVVMKRSKNGKTYWACANPDCDYMSWNEPK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgggaaagaaaaaaaaggtaatcatagtagaatcacctgctaaagcaaaaactatcgaa
aaaatacttggggaagattacaaagttatttcatcaaaaggacatgttagggacttacct
caaaagaaatttggagtaaatctcgaaaatttcgaacctgaatttgaaataatccctggc
aaagaaaaggttgttgaacagatacaaagagaagtaaaaggaaaagaagttttaatagcc
tcagatatggatagggaaggtgaagctatcgcatggcacctttccaatatattaaacctt
tccggaaaaaatcgaataatatttaccgaaattacaccaaatactattaaaaaatccgta
caatctccaagagagatagatataaaaaaagtaaacgcacaacttgcaagaagaatttta
gatagaatagttggttacaaaataagtcctctattatggaaaattataaaaggtgcaatg
agtgccggaagagttcaatctgcagccttaaaaataatttgcgatagagaaagagaaaga
ttcgtctttaaaccaaaagagttttacaaggtctctattgaggtaaaaaaaactaaagca
agcttgtggagtatctctggaaaaaagataaaacaagaaaatgtaacggaaaaaatagca
aatgatataaaagaaaatgttaaagaagtaattttaaaagacattatagaaaaagaacga
aaaaaatcacctccctcaccatatataacaagtacacttcaacaagatgcagcaacaaga
ctggggttccccgtatctaaaaccatgaaaatagcacaatcactatatgaaggcgtaaat
acaaaagatggtcaacacattgcctttattacttacatgagaacagactctacacgcgtt
tctgaagaagcaaaaaacatggcaacagattttattgaaaagaaatttggaaatgaatat
aaaggcggaaaaaaaacaaaaaaacagaaaaagaaagttcaggatgcccatgaatgtata
agacctgtaaacatagaaataactccggaaattgccaaaaacttattaaatcaagatgaa
tacaagttatataaaattatatgggaaagatttcttgcttcgcaaatgaaacacgcaatt
tataaagacaaaacttatatatttcaaagtggaaaatacgaatttagaaccacaatatct
caccgtatatttgatggatttgagataatttacaatacaaaggaaaaaaaagaaaatgaa
ttaaatcttaaagtaggcaaaacatataacgtttcaaaggtaaacaccgaaaaagacatg
acaaaacctccttcaaggtttacagaagcaacacttgtaaaaaaattagagacagaagga
ataggaagaccaagtacttatgcaacgataatctccactcttttgcaaagaaaatatgta
ataaaggaaaagaaagaacttcttccgacacttcttggctttgtagtagaagacttttta
acaaaaaaattcccagaaatagtagacaaaaattttaccgcaacaatggaagcagaactg
gataaaatagagactggtgaaaagcagtggaaaagcgtacttaacgaattttattcagat
ttttcaaagtacctttcaaaagcacaaaaagaattttacaccgtaaactacgaaactgat
ttaaaatgcgaagactgtgaaggtacttataaactgaaaataggaaaatttggcctgtat
ttaaattgtgaatcatgccaaaaaaataaaagtattgataacacaataaatgcagtaata
atagaaaataaagcctatattaacaaagcaattgagaaccacatctctataacagtttct
gaaaacgcatgtccaaaatgcggtggtaatcttacaagaaaaaaaggaaaatttggttat
tactttaaatgtgattcttgtgatttcactatatctggttataaaattgcaagcggaaaa
tgtcccaaatgcaactcaatagtagtaatgaaaagaagcaaaaatggaaaaacatattgg
gcatgcgcaaatccagactgtgattatatgtcatggaatgaacccaaatga
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