Thermosipho sp. 1070: Y592_05925
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Entry
Y592_05925 CDS
T04909
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ther
Thermosipho sp. 1070
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ther03019
]
Y592_05925
Messenger RNA biogenesis [BR:
ther03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Y592_05925
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
NUP160_helical_2
Motif
Other DBs
NCBI-ProteinID:
ANQ53942
LinkDB
All DBs
Position
complement(1158507..1159517)
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AA seq
336 aa
AA seq
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MKLPKELIEKFKEPFISELENYINSDVELIVKVKSKRLLENKNGKKYLLITFEDKTGILR
AIDWFNAEKNNSKVDVGNVVRVNGKIVLYDGRLQLNVHQDSDLIVLNENEYSYERFVSES
KIPVDEIISKLFEIIESIRNKKLKQLLEEIFKNDKELFNKFKNSPAGLKVHHNYIGGLAE
HSITVAKMCDNVAKIYPWLDRDILITGALLHDIGKIYDYEINSKGIEITQTGELIGHIVM
GYEIVNEKIKKLNLRGISEKLLHMILSHHGELEWGSPILPKTPEAFVLHMIENLDSKLNR
IQNIKEKELETNPNKKWSDFDPNLGRRLLLKHTERG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattacccaaagaattgatagaaaaattcaaagaacctttcatatctgaactcgaa
aattatataaactcagatgttgaattaattgtaaaagtaaagagcaaaagactcctagag
aataaaaatggtaaaaaatatttactaataacttttgaagataaaacagggattttaaga
gctattgactggtttaacgcagaaaaaaacaactcaaaagtggatgttggcaatgtggta
agggtaaacggcaaaattgttttatacgatggaagacttcaattaaacgttcatcaagac
tcggatttaattgtattaaatgaaaatgaatattcgtatgaaagattcgtatctgaatca
aaaattcccgtagatgaaattataagtaagctcttcgaaattatcgaatctataagaaat
aaaaaattaaaacaacttttagaggaaatatttaaaaatgacaaggagctttttaataaa
tttaaaaattcaccggcgggattaaaagtacaccacaactatataggaggtcttgccgaa
cattccataacagtggcaaaaatgtgtgataatgtagcaaagatatatccatggcttgac
agagacattttaataactggtgcacttttgcacgatataggaaaaatttacgattatgag
atcaattcaaagggtatagaaattacccaaacaggtgaattaataggtcatattgttatg
ggatatgaaatagttaacgaaaaaataaaaaaattaaacctaagaggaatctcggaaaaa
cttctccatatgatcctttcacatcacggagaattagaatggggttctcctattctccca
aaaacgccggaagcttttgtattacacatgattgaaaatttagactccaaattaaataga
atccaaaatataaaagaaaaagaattggaaacaaatccaaataaaaaatggagcgatttt
gatccaaacctaggaagaagattattactaaaacacactgagaggggataa
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