Thermosipho sp. 1070: Y592_06000
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Entry
Y592_06000 CDS
T04909
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ther
Thermosipho sp. 1070
Pathway
ther03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Y592_06000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ther03400
]
Y592_06000
Enzymes [BR:
ther01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Y592_06000
DNA repair and recombination proteins [BR:
ther03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Y592_06000
RecFOR pathway proteins
Y592_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ANQ53956
LinkDB
All DBs
Position
1170941..1171414
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AA seq
157 aa
AA seq
DB search
MIIIGIDPGYGILGYGVLEKNRNKISHVAHGVITTEKDISMSKRLQIIYEEFVKLLEYYS
PDACAIESLFFYKNVKTAIHVGEARGVILLATSQRNLPLYEFTPYQVKNNITGYGRSDKK
QVQKMVKMLLRLDKIPRPDDAADALAVAWCLAVALRL
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
ttgataataataggtattgatccgggatatggtatactagggtatggagttttggaaaaa
aatagaaataagatttctcatgtagctcatggagttattacaacagaaaaagatatttcc
atgtcaaagagactccaaattatatacgaagaatttgttaaattacttgaatattattct
ccagatgcgtgtgcaatcgaaagtttgtttttttataaaaatgtaaagactgctatccat
gtaggtgaagcaagaggagtaatattacttgcaacatctcaaagaaatttgccgttatat
gagtttaccccgtatcaagtaaaaaataacattaccggttatggaagatctgataaaaaa
caagtacaaaaaatggtaaaaatgcttttgagattggataaaattccgagacctgatgat
gcagctgatgcattagctgtcgcttggtgtttagcagtggcattaaggttgtaa
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