Thermosipho sp. 1070: Y592_06690
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Entry
Y592_06690 CDS
T04909
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ther
Thermosipho sp. 1070
Pathway
ther03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Y592_06690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ther03019
]
Y592_06690
Messenger RNA biogenesis [BR:
ther03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Y592_06690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
UPF0154
KH_NusA_2nd
FokI_dom_2
dUTPase
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ANQ54085
LinkDB
All DBs
Position
1301310..1302842
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AA seq
510 aa
AA seq
DB search
MLTYILTGIGLLIGAFSGYVIAKKKIEKQLLITKQDAEHIIKNAEKEASEIKKKAVIESR
EELHRMREEWEKEKKEREEEIRYLEDRLMKREEMLSKREELLDKKESYIEEMRKELDAKQ
KDLIEKEKELTERFERLAGITPEQAKEMVLEEAREKYEYEIAKVYSQIKSRYEEDSEKYA
KKVIADAIQRYAPEYAGEVTVSTIMLPNDDMKGRLIGREGRNIRAFEKVTGVDLIIDDTP
EMVTVSCFNPLRREIARRTIEKLVADGRIHPTRIEEMYEKSKSEVEKVIREAGQEATFVT
GVGGLHPEVIKLLGRLKFRTSYGQNVLNHSIEVALIAGLIASELGVNVEKAKRGGLLHDI
GKALDHEVEGSHTVIGAEILKRYGESREIINMVMAHHGEEEPMTPEAVIVAAADALSAAR
PGARREDVENYIKRLIKLEEIAKSFKYVENAYAIQAGREVRVIVQPDKIDDALADKLSHD
IAIKIEEELQYPGVLKVVVIREKRSVAYAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatatatactaacgggaataggattattaattggtgcattttcgggatatgtt
atcgcaaagaaaaaaatagaaaagcaacttttgattacaaagcaagatgcagagcatata
ataaaaaatgcggaaaaagaagcaagtgaaatcaaaaagaaagccgttattgagtcaaga
gaagaactccacaggatgagggaagagtgggaaaaagaaaagaaagaaagagaagaggaa
attagatatttagaagatagattgatgaaacgagaagaaatgttgtcaaaaagggaagaa
ctccttgataaaaaggaaagttatattgaagagatgagaaaggaattagatgcaaaacaa
aaagatctaattgaaaaagaaaaagaattaactgaaagatttgaaagacttgctggtata
acccctgagcaagctaaagaaatggttttggaagaggcgcgtgaaaaatatgaatatgaa
atagcaaaagtttattctcaaataaaatcaaggtacgaagaagattctgaaaagtatgct
aaaaaggtaatagcagatgctattcaaaggtatgcgccagaatatgcaggtgaagtgacg
gtaagtaccataatgttgccaaacgatgatatgaagggaaggttaattggtagagaaggt
aggaatataagggcatttgaaaaagtaactggagttgacttgataatagatgatacccct
gagatggttaccgtaagttgttttaatcctttaaggagggaaattgcaaggagaactata
gaaaaattagtagctgatggtagaatacatccaacgagaatagaagaaatgtatgaaaaa
tcaaaatctgaggttgagaaggtaataagagaggcaggacaagaggcaacattcgttaca
ggtgttggaggtttacatccagaagttattaagttacttggaagattgaaatttagaaca
agttacggtcaaaatgttttgaatcattctatagaagtggcattaattgcgggattaata
gcatctgaattaggtgtaaatgttgaaaaagcaaaacgtggaggactattacacgatatt
ggaaaagctcttgatcacgaagttgagggttcacatacagtaattggtgcagaaattcta
aaaagatatggtgaaagccgagaaataataaacatggtaatggcacatcatggagaagaa
gaaccaatgacaccagaagcggttatagttgctgctgcagatgccctatcagcagcacgt
ccgggtgcaagaagagaagatgtggaaaattacattaaaagactcatcaaacttgaagaa
atagcaaagagttttaaatatgtggagaatgcgtatgcaattcaagcaggaagagaagtc
agagttattgttcaaccggataaaattgatgatgcattagcagataaactatcccatgat
attgcaataaaaattgaagaggaattacaatatcccggtgttttaaaagtggtagttatt
agagagaaaagaagtgtagcttatgcaaaataa
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