Thermosipho sp. 1070: Y592_07960
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Entry
Y592_07960 CDS
T04909
Name
(GenBank) RNA polymerase sigma70
KO
K02405
RNA polymerase sigma factor FliA
Organism
ther
Thermosipho sp. 1070
Pathway
ther02020
Two-component system
ther02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Y592_07960
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Y592_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ther03021
]
Y592_07960
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ther02035
]
Y592_07960
Transcription machinery [BR:
ther03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Y592_07960
Bacterial motility proteins [BR:
ther02035
]
Flagellar system
Flagellar assembly proteins
Stator
Y592_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
PCI
MarR_2
Mitovir_RNA_pol
HTH_23
HTH_AAA_fung
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
ANQ54325
LinkDB
All DBs
Position
1530122..1530799
Genome browser
AA seq
225 aa
AA seq
DB search
MIDKDKIVLEYLPYVRRIAYDLKKNLPHNVEVDDLIQEGLIGLLQAVERFDPKKGSKLRS
YLLTRVKGAMYDYLRKIDWMPKNLRHEVKIVENAISKTENSGSKIDFEELSKLTNLPLEN
VRRAYNEMVRKQFLMLDDYLIEDIEIKETISSDDNPEENALKEIIKEELIKAISKLSEKE
QLVLSLRYEQELSLKEIGKVLDLTESRVSQILSSTILKLKKMLGG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttgatagataaagataaaatagttttagaatacctgccatatgtaaggagaatagcttac
gatttaaaaaaaaatttaccccataacgttgaagtagatgatttaatacaagaaggtctt
ataggcttgcttcaagcagtggaaaggtttgatccaaaaaaagggtcaaaattaagatca
tatttattaacaagggtaaaaggtgctatgtacgactatcttagaaaaattgactggatg
cccaaaaatttaagacatgaagttaaaattgtcgaaaatgcaatttcaaaaactgagaat
tctggaagtaaaattgattttgaagaactttcaaaacttactaatctcccattggaaaat
gtgagaagagcatataacgaaatggtaagaaagcaatttttaatgcttgatgattatttg
attgaagatattgaaataaaagaaactatttcttctgatgacaatcctgaagaaaatgca
ttaaaagagattataaaggaggaattaataaaggcgataagtaaattgagcgaaaaagaa
caattggtattaagcttaaggtatgaacaagaactttcactcaaagaaatagggaaagtc
cttgatttgactgaatcaagagtttctcagatactcagttcaacgattttgaagctaaag
aagatgttggggggataa
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