Thermomonas aquatica: FHQ07_01955
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Entry
FHQ07_01955 CDS
T06025
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
thes
Thermomonas aquatica
Pathway
thes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHQ07_01955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thes03019
]
FHQ07_01955
03009 Ribosome biogenesis [BR:
thes03009
]
FHQ07_01955
Enzymes [BR:
thes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FHQ07_01955
Messenger RNA biogenesis [BR:
thes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHQ07_01955
Ribosome biogenesis [BR:
thes03009
]
Prokaryotic type
rRNA helicases
FHQ07_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
AAA_19
UvrA_inter
HEM4
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDA56167
UniProt:
A0A5B7ZMN8
LinkDB
All DBs
Position
422992..424788
Genome browser
AA seq
598 aa
AA seq
DB search
MSADTPTTTFADLGLPDSLLAALREVGYETPSPIQAATIPALLAGRDMIGQAQTGTGKTA
AFALPALARLEAAANKPQVLVLAPTRELAIQVAEAFQKYAHHIPGFHVLPIYGGQSYTPQ
LSALKRGVHVVVGTPGRVIDHLERGSLDLSQLRMLVLDEADEMLRMGFIDDVEAVLKKTP
ETRQVALFSATMPAQIKRIAQTYLKDPAEIAIKAPTTTAENIRQRFWMVSGVNKLDALTR
IMEAEPFDAMIIFARTKLGTDELAEKLAARGFSAAAINGDVEQKTRERTIQRLKDGQIDV
LVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERGMLG
AIERATRQKIEQMNLPSVDAVNERRVAKFLDKIEGALASDDLSVFRDLVERYEREKNVPA
VEIAAALAALVQGKTPLLLAKPAVPERTFEIRERAERPERPAREPRERTPRDPNAPDVPM
KTYRIEVGYQHGAQPGHIVGAIANEADLESRFIGRIDIRDDYTLVDLPDGMPPDLLQHMQ
NVRVASKPLRMKEATAEDIDAPKRKRSFGPPRGDRPDGPRKPGGFKKPGGFKPRGPRS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgacaccccgaccaccaccttcgccgacctcggcctgcccgattcgctgctg
gccgccctgcgcgaagtgggttacgaaacccccagcccgatccaggccgccaccatcccc
gccctgctggccggccgcgacatgatcggccaggcgcagaccggtaccggcaagaccgcc
gccttcgccctgcccgcgctggcgcggctggaagcggccgccaacaagccgcaggtgctg
gtgctggcgccgacccgcgagctggcgatccaggtcgccgaggccttccagaaatacgca
caccacattcccggtttccacgtgctgccgatctacggcggccagagctacacgccgcag
ctgagcgcgctcaagcgcggcgtgcacgtcgtcgtcggcacgcccggccgcgtgatcgac
cacctcgaacgcggttcgctcgacctgtcgcagctgcgcatgctggtgctggacgaagcc
gacgaaatgctgcggatgggcttcatcgacgatgtcgaagccgtgctcaagaagaccccg
gagacccgccaggtcgcgctgttctcggcgacgatgccggcgcagatcaagcgcatcgcc
cagacctatttgaaggatccggcggagatcgcgatcaaggcgccgaccaccaccgccgag
aacatccgccagcgcttctggatggtcagcggggtcaacaagctggatgcgctgacccgg
atcatggaagccgagccgttcgacgcgatgatcatcttcgcgcgcaccaagctgggcacc
gacgagctggccgagaagctggcggcgcgcggcttcagcgcggcggcgatcaacggcgac
gtcgagcagaagacccgcgagcgcaccatccagcgcctgaaggacggccagatcgacgtg
ctggtggccaccgacgtggccgcgcgcgggctggacgtagagcgcatcagccacgtgctg
aactacgacatcccctacgacaccgaaagctacgtgcaccgcatcggccgcaccggccgc
gccgggcgcaagggcgaggcgatcctgttcgtggccccgcgcgagcgcggcatgctgggc
gcgatcgagcgcgccacccggcagaagatcgagcagatgaacctgcccagcgtcgacgcc
gtcaacgagcgccgcgtggccaagttcctggacaagatcgagggcgcgctggccagcgac
gacctctccgtgttccgcgacctggtcgaacgctacgagcgcgagaagaacgtgccggcg
gtggagatcgccgccgcactggccgcgctggtgcagggcaagaccccgctgctgctggcc
aagccggcggtgccggaacgcacgttcgagatccgcgagcgcgccgaacgccccgaacga
cccgcgcgcgagccgcgcgaacgcaccccgcgcgacccgaacgcgccggacgtgccgatg
aagacctaccgcatcgaagtgggctaccagcacggcgcgcagcccggccacatcgtcggc
gcgatcgccaacgaggccgacctggaaagccgtttcatcggccgcatcgacatccgcgac
gactacaccctggtcgacctgccggacggcatgccgccggacctgctgcagcacatgcag
aacgtgcgcgtggccagcaagccgctgcgcatgaaggaagcgaccgccgaggacatcgat
gcgcccaagcgcaagcgcagcttcggcccgccacgcggcgaccgccccgacggcccgcgc
aagcccggcgggttcaagaagcccggcggcttcaaaccgcgcggcccgcgttcctga
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