Thermomonas aquatica: FHQ07_02750
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Entry
FHQ07_02750 CDS
T06025
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thes
Thermomonas aquatica
Brite
KEGG Orthology (KO) [BR:
thes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thes03016
]
FHQ07_02750 (rnd)
Enzymes [BR:
thes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FHQ07_02750 (rnd)
Transfer RNA biogenesis [BR:
thes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FHQ07_02750 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDA56313
UniProt:
A0A5B7ZP43
LinkDB
All DBs
Position
604241..605341
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AA seq
366 aa
AA seq
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MTNWIDTPDALRARLANPPAIIGLDTEFIRERTYWPQLALVQIALGEAERDILLVDPLVP
GMCDALAPLLADPAVLKVMHSASEDLVAFKHACGVLPAPMFDTQLAAALAGVGGGMGYQK
LVQAVTGVALAKGETRSDWLRRPLSASQLEYAADDVRHLHALHRHLDALLATRDRGAWLQ
EDCARLLATVADDHGERWPQLSLRSAQFLDRAGQVRLLRLLRWRDAHARRSDRPRSWILD
NELAFAIARAAPGDRAGVQAILDSTPKASRSLGEAMFEALTTPLPDEAESPPARGDDRDK
KQLRALQDAVAAAATDLGLPEGLLASRRLLEALQDGGGWNGPLAGWRRGVLEDRLHPLLA
AAAPAA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattggatcgacactcccgacgcgctgcgcgcgcgcctcgccaacccgcccgcc
atcatcggcctggataccgaattcatccgcgaacgcacctactggccgcaactcgcgctg
gtgcagatcgcgctgggggaagcggaacgggacatcctgctggtcgatccgctggtgccc
gggatgtgcgatgccctcgcgccgctgctggccgatcccgcggtgttgaaggtgatgcac
agcgccagcgaggacctggtcgcgttcaagcatgcctgcggggtgttgccggcgccgatg
ttcgacacccagctcgcggcggcgctggccggcgtcggcggcgggatgggttaccagaag
ctggtgcaggcggtgaccggggtggcgctggccaagggcgagacccgctccgactggctg
cgccgcccgctgtccgcgtcgcagctggaatacgcggcggacgacgtgcgccacctgcat
gcgctgcaccgccacctggacgccttgctggccacccgcgaccgcggcgcatggctgcag
gaagactgcgcgcgcctgctcgccacggtcgccgacgaccatggcgaacgctggccgcag
ctgtcgctgcgcagtgcgcagttcctcgatcgcgccgggcaagtgcgtctgttgcgcctg
ttgcgctggcgcgacgcccatgcgcgccgcagcgaccggccgcgcagctggatcctcgac
aacgagctggcgttcgccatcgcccgcgccgcacccggcgatcgcgccggcgtgcaggcg
atcctcgacagcaccccgaaggcgtcgcgcagcctgggcgaggcgatgttcgaggccctg
accacgccgttgccggacgaagccgaaagcccgcccgcgcgcggcgacgaccgcgacaag
aaacagttgcgcgcgctgcaggatgcggtggcggcggcggcgactgacctcggcctgccc
gagggcttgctggcctcgcgccggctgcttgaagccctgcaggatggcggcggctggaac
ggcccgcttgccggttggcggcgcggcgtgctggaggatcggctgcaccccctgctggcc
gccgccgcacccgccgcatga
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