Thermomonas aquatica: FHQ07_03015
Help
Entry
FHQ07_03015 CDS
T06025
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
thes
Thermomonas aquatica
Brite
KEGG Orthology (KO) [BR:
thes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thes03009
]
FHQ07_03015 (rlmD)
Enzymes [BR:
thes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FHQ07_03015 (rlmD)
Ribosome biogenesis [BR:
thes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FHQ07_03015 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltr_RsmB-F
TRAM
Methyltransf_11
Methyltransf_4
Ubie_methyltran
RrnaAD
Methyltransf_12
UPF0020
Methyltransf_23
FtsJ
CMAS
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QDA56357
UniProt:
A0A5B7ZNA1
LinkDB
All DBs
Position
complement(666954..668327)
Genome browser
AA seq
457 aa
AA seq
DB search
MRPFAALSLVARLDHSPKTLSIVNLGHDGRGVGRWPEGHANAGKTVFVAGALPGETVSVQ
QTARSRHFDEAKTLEVLEASPDRVEPRCPHFGTCGGCVLQHFAEDRQIEAKQRQLLDNLQ
RIGHVAPQAVLPPLRGDSWGYRRKGRFSVRRVEKKDKTLVGFREQDPRFVADIGECHVVV
PQLGFKVAALGALVDGLDARRDIPQIEFITGDAHVALVFRHLQPLSEADKAKLEAFGAAQ
GFSIFLQPGGNDSVHPLSGDAPQLSFRLPQWDIELLFRPLDFIQVNAKLNEAMIARALEL
LDVQPGERVLDLFCGLGNFTLPLARAAGDGAVVGVEGEAGLVQRARANAEHNGLANVQFH
AADLSQDLAAQPWLKAGFDKLLLDPARSGAIEVLKQLPLKGLKRIVYVSCHPGSLARDAG
YLVNEAGWTLREAGVMDMFPHTAHVESIAVFDPPKKG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcggccattcgcagcattgagcctcgtggcccgcctcgatcattcccccaagaccctg
tccatcgtcaacctcggccatgacggtcgtggcgtcgggcgctggccggaaggccatgcc
aacgcaggcaagaccgtgttcgtggcaggcgccttgcccggcgaaacggtgagcgtgcag
caaaccgcgcgttcgcggcatttcgacgaggcgaagacgctggaggtgctcgaggcatcg
ccggaccgcgtcgagccgcgttgcccgcatttcggcacctgcggcggctgcgtgctccag
cacttcgccgaagaccggcagatcgaggccaagcagcgccagttgctggacaacctgcag
cgcatcggccatgtcgcgccgcaggcggtgctgccgccgttgcgcggcgacagctggggc
tatcgccgcaaggggcgcttctcggtgcgccgagtcgagaagaaggacaagaccctggtc
gggttccgcgagcaggatccgcgcttcgtcgccgacatcggcgaatgccatgtcgtggtg
ccgcagctcggcttcaaggtcgcggcgcttggcgcgctggtcgacggcctggatgcgcgc
cgcgacatcccgcagatcgagttcatcaccggcgatgcgcatgtcgcgctggtgttccgc
cacctgcagccgctgtcggaggccgacaaggcgaaactcgaggccttcggtgccgcccag
ggcttctcgatcttcctgcaacccggcggcaacgattccgtgcatccgctgtcgggcgat
gcgccgcagctgtcgttccgcctgccgcaatgggacatcgaactgctgttccgcccgctg
gacttcatccaggtcaacgccaagctcaacgaggcgatgatcgcgcgcgcgctggaactg
ctcgacgtgcagccgggcgagcgcgtgctcgacctgttctgcggcctgggcaatttcacc
ctgccgctggcgcgtgccgccggcgacggcgcggtggtcggcgtggagggtgaggccggc
ctggtgcagcgcgcccgcgccaatgccgagcacaatggccttgcgaacgtgcagttccat
gccgccgacttgtcgcaggacctggccgcgcagccgtggctcaaggcgggcttcgacaag
ctgctgctggacccggcgcgttcgggtgcaatcgaagtgctcaagcagctaccgctcaag
ggcctgaagcggatcgtctacgtgagctgccatccgggttcgctcgcccgtgatgctggc
tacctcgtcaacgaggccggctggaccctgcgcgaagcaggggtgatggacatgttcccg
cacaccgcgcacgtcgaatccatcgccgtgttcgatccgccgaagaagggttga
DBGET
integrated database retrieval system
