Thermomonas aquatica: FHQ07_06710
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Entry
FHQ07_06710 CDS
T06025
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thes
Thermomonas aquatica
Pathway
thes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHQ07_06710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thes03019
]
FHQ07_06710
03400 DNA repair and recombination proteins [BR:
thes03400
]
FHQ07_06710
Enzymes [BR:
thes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHQ07_06710
Messenger RNA biogenesis [BR:
thes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHQ07_06710
DNA repair and recombination proteins [BR:
thes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FHQ07_06710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QDA57029
UniProt:
A0A5B7ZQI3
LinkDB
All DBs
Position
complement(1392650..1394737)
Genome browser
AA seq
695 aa
AA seq
DB search
MRYDRTRALELLRMACGDPSATFREGQEEAISGLVEGNGRLLVVQKTGWGKSAVYFIATK
LLREANRGPALLISPLLALMRNQISDAQRMGLKAVTINSSNSNQWSTIDTEIAAGRVDIL
LISPERLANKKFQDGVFANIAANTPLLIVDEAHCISDWGHDFRPHYRQIERIIRSLPGNV
RVLATTATANNRVMEDLTAVLGPNLKVSRGDLGRRSLTLQTITLPSYGERLAWLAQQMGR
IEGHGIIYTLTTRDAESVAEWLRRQGFAAESYTGSTGPTREYLEQALLENKVKALVATSA
LGMGFNKPDLSFVIHFQSPGSVVAYYQQVGRAGRAVDDAYGIMLGGDGDDTINEWFVQSA
FPTQGEVSLVLERLSQASGGMTSDELLETANISPIRLEKTVELLSLESPAPLVEENGRLY
RTASDVPNTFWERARRLTELRLRECEEMREYQALPFGTHMAFLVRSLDGDPGGVAAPRLP
ELADAIDSKLLDEATSYVRANQHTIQPRKEWPRGGLPKYGIHARLGPRAIGAPHRANPGL
VLSEWGDFGWAPMVKKGKYEAGEFGDDLVDASADLIADWAPEPPLQWVTCVPSLRHPRLV
PSFASRLAKRLGLPFIPLIEKTEDRPPQKSLKNSPLQVKNVDGSFRLNSGVSQGAVLLVD
DMVDSRWTMTVCAWLLRSEGSGEVFPFALARTGRG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaggtacgacaggacgcgcgctctagagcttctccgcatggcttgtggggaccccagc
gccacgtttcgcgaggggcaggaagaggctattagcggactagttgaaggcaatggccgc
ctgcttgttgtccaaaaaacagggtgggggaagagtgccgtctacttcattgcaacgaag
ctacttcgtgaagcgaaccggggtcctgcgctgctgatctcgccgcttctcgcgctgatg
cggaatcaaatttccgatgcgcaacgtatgggcttgaaagccgtaacgatcaactccagc
aattccaatcagtggtcgacaatcgacaccgagatagcggcaggcagggttgacatactt
ctcatctcacctgagcggcttgcaaataagaagtttcaggatggagttttcgctaacatt
gccgctaataccccattgcttattgtcgacgaggcccattgcatctcagactggggccac
gatttccgaccgcattatcgtcagattgaacgaataattcgctcgctacctggcaacgtg
cgcgtattagcaaccacagcgacggcaaacaatcgggtcatggaggatttgacagcagtc
cttggccccaatctgaaagtctcccgcggagatctcggtcgacggtctctaacattacag
accatcacgctacctagctacggagaacgtctcgcttggctggcgcagcaaatggggcgg
atcgagggccatggcatcatttatacgctgaccactcgggatgccgagagcgtagctgag
tggctgcggcgtcagggatttgccgcagaatcctatacaggctcgacggggccgacacgc
gagtacctagagcaggcgctgctcgaaaataaagtcaaggcgttggtggcaacgagcgcg
ttgggcatgggcttcaacaagccggatctttcgttcgtcattcatttccaatcgcctggc
tccgtagttgcgtattaccagcaagtaggccgtgccggtcgggctgtcgatgatgcctat
ggaattatgctcggcggcgacggcgacgacaccattaacgagtggttcgttcagagcgcg
ttccccactcagggagaggtctcccttgttctggaaaggctctcacaagcaagcggagga
atgacctctgatgagcttctagagacggcgaacattagcccgattcggctagaaaagacc
gtcgaacttctgtcgttggagtcaccagctccgctcgttgaagagaacggtcgcttgtat
aggacggcatccgatgtgccaaacaccttttgggagcgggcacgccgtctgaccgagctc
aggctccgcgagtgcgaggagatgcgcgagtatcaggcgctccccttcggtacgcacatg
gcattccttgtcaggtccttggacggtgatcccggaggggtcgcagccccaaggctccct
gaactagcggacgcaattgactctaaactcttggatgaagccacttcttacgttcgggcg
aaccagcacacgatccagccgcgcaaggaatggccgagaggcggtttaccaaagtacggg
attcatgcgcggcttgggccccgagccatcggtgcgccccatcgagcaaacccgggactc
gtcctgagtgaatggggtgattttgggtgggctcccatggtgaagaaaggaaagtacgag
gcaggcgaattcggcgatgatttggtcgatgcgtcggcagacctcatcgccgactgggct
ccggagccgccgcttcaatgggtgacgtgcgtcccttcactgcgccacccgaggctggtt
ccctctttcgcctcccgcttggccaagcggttagggctccccttcattccgctgatcgaa
aaaactgaagatcgtcctccgcagaaatcattgaagaacagtccacttcaagtgaagaat
gtcgatggatcatttcgtttgaattctggggtatcccagggggcggtacttttggttgat
gacatggtggactctcgttggactatgaccgtctgcgcatggctgctgcgctctgagggt
agcggcgaggtatttccgtttgcactggcgcggacggggcgcggctaa
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