Thermomonas aquatica: FHQ07_07980
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Entry
FHQ07_07980 CDS
T06025
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
thes
Thermomonas aquatica
Pathway
thes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHQ07_07980 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thes03019
]
FHQ07_07980 (rhlB)
Enzymes [BR:
thes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FHQ07_07980 (rhlB)
Messenger RNA biogenesis [BR:
thes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHQ07_07980 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RhlB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDA57255
UniProt:
A0A5B7ZRI1
LinkDB
All DBs
Position
complement(1662631..1664301)
Genome browser
AA seq
556 aa
AA seq
DB search
MSDKPLTDITFSSFDLHPALLAGLEAAGFTRCTPIQALTLPLALNGRDVAGQAQTGTGKT
LAFLVAVIDRLLKRPALADRKPEDPRALILAPTRELAIQIHKDAVKFASDLGLKFALVYG
GVDYDKQREQLQKGADIIIATPGRLIDYVKQHKVVSLHACEMCVLDEADRMFDLGFIKDI
RFLLRRMPVRTERQTLLFSATLSHRVLELAYEHMNEPEKLVVETESITAARVRQKLYYPA
DEEKIPLLIGLLSRSEGARTMVFVNTKAFVERVARALERAGYRVGVLSGDVPQKKRESLL
KKFQAGQLELLVATDVAARGLHIDGVSHVYNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMSLPDIEAYIEQKIPSEPVTQELLTALPRKPREGVELQAEEGESIGEIFREVRE
ARAAEDAKRGGGRSGGRPGGRGERSGPRPDSGERRERGPRPPRKPRVEGDAVAAAPAVAA
APATPKPAAAEGERPARKRRRRRGGQRLENGEAIAQPQQAAATPSSATAPAAQPSLLSRI
GRGLKSLVTRSPSKQH
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaaacccctgaccgacatcaccttttcctccttcgacctgcatccggccttg
cttgccgggcttgaggccgccggcttcacccgctgcacgccgatccaggcgctgaccctg
ccgctggcgctgaacggccgcgacgtggccggccaggcgcagaccggcaccggcaagacc
ctggccttcctggtcgcggtgatcgaccgcctgctcaagcgcccggcgctggccgaccgc
aagcccgaagacccgcgcgcgctgatcctcgcccccacccgcgaactggcgatccagatc
cacaaggacgcggtgaaattcgcctccgacctcggcctgaagttcgcgctggtgtacggc
ggcgtggactacgacaagcagcgcgagcagctgcagaagggcgccgacatcatcatcgcc
acccccggccggctgatcgactacgtcaagcagcacaaggtggtcagcctgcacgcctgc
gagatgtgcgtgctggacgaggccgaccgcatgttcgacctcggcttcatcaaggacatc
cgcttcctgctgcggcgcatgccggtgcgcaccgagcgccagaccctgctgttctccgcc
accctcagccaccgcgtgctggagctggcctacgagcacatgaacgagcccgagaagctc
gtcgtcgaaaccgaatcgatcaccgccgcgcgggtccgccagaagctgtactacccggcc
gacgaggagaagatcccgctgctgatcggcctgctgtcgcgcagcgagggcgcgcgcacc
atggtcttcgtcaacaccaaggccttcgtcgagcgcgtcgcgcgcgcgctggagcgcgcc
ggctaccgggtcggcgtgctcagcggcgacgtgccgcagaagaagcgcgaatcgctgctg
aagaagttccaggccggccagctggagctgctggtcgccaccgacgtggccgcgcgcggc
ctgcacatcgacggcgtctcgcacgtctacaactacgacctgccgttcgatgccgaggat
tacgtgcaccgcatcggccgcaccgcccgcctcggcgccgagggcgacgcgatcagcttc
gcctgcgagcgctacgcgatgtcgctgccggacatcgaggcctacatcgagcagaagatc
ccgtccgagccggtgacccaggagctgctgaccgcgctgccgcgcaagccgcgcgagggc
gtggagttgcaggccgaggaaggcgagagcatcggcgagatcttcagggaagtgcgcgag
gcgcgcgccgccgaggatgccaagcgcggcggtggccgcagcggcggtcgcccgggcggc
cgcggcgagcgcagtggcccgcgtcccgattccggcgagcgccgcgagcgcggcccgcgt
ccgccgcgcaagccgcgcgtggagggcgatgccgtcgccgccgcgcctgccgttgccgcg
gcgccggccacgccgaagccggcagcggccgagggcgagcgcccggcgcgcaagcgccgc
cgccgtcgcggcggccagcgcctggagaacggcgaggcgatcgcgcagccgcagcaggcc
gcggcaaccccttcgtccgcgaccgcgccagccgcgcagccttcgttgctgagccgcatc
ggccgcggcctgaaatcgctggtgacccgttcgcccagcaagcagcactga
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