Thermomonas aquatica: FHQ07_09050
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Entry
FHQ07_09050 CDS
T06025
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
thes
Thermomonas aquatica
Brite
KEGG Orthology (KO) [BR:
thes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thes03016
]
FHQ07_09050
Enzymes [BR:
thes01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
FHQ07_09050
Transfer RNA biogenesis [BR:
thes03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
FHQ07_09050
Prokaryotic type
tRNA splicing ligases
FHQ07_09050
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Hexapep
Gam
Motif
Other DBs
NCBI-ProteinID:
QDA58510
UniProt:
A0A5B7ZU73
LinkDB
All DBs
Position
complement(1906667..1907890)
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AA seq
407 aa
AA seq
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MQTQSQFELLHAEDSATPIKGWVHGVPLEPQAHEQLRNIASIPFVGPWVAVMPDVHLGKG
ATVGSVIPTRGAIIPAAVGVDIGCGMAAVRTTLRASDLPDDLGPLRNSIERSVPVGNGRG
GEHWKLPDGIETRVAQSGLVQRLDAIQQKHRKIRTDKLDRQIGTLGGGNHFIELCLDESD
AVWVMLHSGSRGTGNLIGSYFIERAREELGKRVLGFHVPDKDLAFFLQGEPLFDDYVEAV
SWAQDYARENREAMMARVLHEMRHRLPKFQLEKMAVNCHHNYVQQEMHGGVDLLVTRKGA
VSARAGELGIIPGSMGAKSFIVRGLGNADSFHSCSHGAGRVMSRTAARAQITLAQHRQAT
AHVECRKDAGVIDESPAAYKDIDAVMAAQSDLVEIVHTLRQVVCVKG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacccaatcgcaattcgaactgctgcacgccgaggacagcgccaccccgatcaag
ggctgggtgcacggcgtgccgctggagccgcaggcgcacgagcaactgcgcaacatcgcg
tcgatcccgttcgtcgggccgtgggtcgcggtgatgccggacgtgcacctgggaaagggc
gcgaccgtgggctcggtgatcccgacccgcggcgcgatcatcccggccgcggtcggcgtc
gacatcggctgcggcatggccgcggtgcgcaccaccctgcgcgccagcgacctgcccgac
gacctcggcccgctgcgcaactcgatcgagcgcagcgtgccggtcggcaacggccgcggt
ggcgagcactggaagctgccggacggcatcgagacccgcgtcgcgcagtcgggactggtc
cagcggctggacgcgatccagcagaagcaccgcaagatccgcaccgacaagctcgaccgg
cagatcgggacgctgggcggcggcaaccacttcatcgagttgtgcctcgacgagagcgat
gcggtgtgggtgatgctgcacagcggttcgcgcggcactggcaacctgatcggcagctac
ttcatcgagcgggcgcgcgaggagctgggcaagcgcgtgctcggtttccacgtgccggac
aaggacctcgcgttcttcctgcagggcgagcccctgttcgacgactacgtggaggcggtg
tcgtgggcgcaggactacgcccgcgagaaccgcgaggcgatgatggcgcgggtgctgcac
gaaatgcgccatcgcctgccgaagttccagctggaaaagatggcggtgaactgccaccac
aactacgtgcagcaggagatgcatggcggcgtggacttgctggtcacccgcaagggtgcg
gtgagcgcgcgtgccggcgagctcgggatcatcccgggcagcatgggcgcgaagagcttc
atcgtgcgtgggctgggcaacgcggacagcttccacagctgcagccacggtgccggccgc
gtgatgagccgtaccgccgcgcgcgcgcagatcaccctggcccagcatcggcaggccacc
gcccacgtcgagtgccgcaaggacgccggcgtgatcgacgagtcgccggccgcgtacaag
gacatcgacgcggtgatggcggcgcagtccgacctggtggaaatcgtgcacacgctgcgc
caggtggtgtgcgtgaagggatga
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