Thermodesulfobacterium sp. TA1: F1847_00715
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Entry
F1847_00715 CDS
T06202
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
thet
Thermodesulfobacterium sp. TA1
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thet03400
]
F1847_00715
DNA repair and recombination proteins [BR:
thet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1847_00715
Archaeal homologous recombinant proteins
F1847_00715
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
TsaE
SMC_N
GTP_EFTU
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QER41329
UniProt:
A0A5P1UWK1
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Position
complement(149978..152977)
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AA seq
999 aa
AA seq
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MRPLFLSIKGLGPYLSVQISEEVFKELNENRLFLISGEIGAGKTTLFDAIVYALYGSTTI
NKRDPKSLISTLTKNHSEVIPEVEFKFFLDGQVYRIKRRFPYEGKPKKVSLWIEESFFSD
KEQEINHKIQELIGLNADQFKKVFLIPQGEYRNILLTNTNEREELFKTIFDTFMFVNLEE
FLKQRLKDLKAQLQSLLDQEKQLKELVKVEKIEDLENKIRDKKNRLLSLESQANKLAKEK
EFLTSQILEQQNLLSLIKKYQEILKTLKNLDALEEEIKQKEKRLEILKRIKEYLPFYENV
NRLKQEILDKNIEIKDLLAKEKSLSQILVNLSKKLEFLLEQAPEIEKLKIKVANQKQLKE
RIVEKNFLEKEVKKLSYEVEKKEQEVRSIQEKIKKLKAHLEEIYEKRNLLLKIQSLLKDE
ERLRDLAQKFNHLKTILEKKPEIEEKIASISQEIHRLEREKRDLEIKNLALAVSQFLEKD
KPCPVCGSTHHPAPIKDENFTERLKKIELALKNKNAELEKTKTYFDKLEGKLEHLKKELL
PYKDKEEEILQKLTEIDTQKSRHLDLISLYQNHPSSIQELESLSQTLKETLNQNEEKEKE
LSGELESKKQKLLGLKGRLEGLLNDLKGQVDTLEALKAKIDHEEKIIAKFENQKKQVEQD
LKNYSIEKTAVAQDLKNQKEFLQHLLKNYKDQILKILPLKRQNLIKQLYEFETLKTEIAK
IQNLEAEINEFYQKKEKLKAEKEEIERELKILSQETLEELEKKIAQALEALNQKKKNVED
LFTKVNQEIGMEINEIEKFETILSSYQGLEKNLKKTEQECRVLGKLVDLISGKNLKGISF
HSFVVSMFAKLIFQRANTYLWEFSFGRYKFLEEIFLQKRGSIEIFDYFTGDKREVKTLSG
GESFIATLALALGTSDVITYLFKAKPFESLFIDEGFGSLDENTLNKVIEILLNLSEKSGR
IIGIISHLKEMKESFPLVLEVLKDPVSGSKINLIRKLPS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcttttcctttctatcaaaggattgggtccctacctaagtgttcagattagt
gaagaggtttttaaagaattaaacgaaaatcgtttgttcttgatctcaggagagataggg
gcaggaaaaaccacgctttttgatgctattgtttatgccctttatggaagcactacgata
aacaaacgagaccctaaatcccttatctcaacccttaccaaaaaccattctgaagttatt
cctgaggtagagtttaaattttttttagacggtcaggtctacagaattaaacgcaggttc
ccttatgaaggtaaacccaaaaaagtaagcctctggatagaagaaagttttttttcagat
aaagaacaagaaattaaccataaaatacaagaattaatcgggcttaacgccgatcagttt
aaaaaggtttttttgataccccaaggagaataccgtaatatccttcttacaaacacaaac
gaaagagaagagcttttcaaaacgatttttgatacctttatgtttgtcaacttggaggaa
tttttaaaacaaagactaaaggaccttaaagcccaactccaatctcttttagaccaggaa
aaacaacttaaagaattagtaaaggttgaaaaaatagaggaccttgaaaacaaaataaga
gacaaaaaaaatcgtcttttaagcttagaatctcaagctaacaagcttgccaaagaaaaa
gaatttctaacctcccaaatattagagcaacaaaaccttttatcccttataaaaaaatat
caagaaatccttaaaacacttaaaaaccttgatgcccttgaagaagaaataaaacaaaaa
gaaaaaagattagaaattttaaaaagaataaaagaataccttcccttttatgaaaacgta
aatagattaaaacaggaaattttagataaaaacatagaaattaaagaccttttagctaaa
gaaaaaagcttgtctcaaattttagtaaacctttctaaaaagttagagtttctcttagaa
caagcccctgagatagaaaaacttaagataaaggttgcaaaccaaaaacaattaaaagaa
agaatcgttgaaaaaaactttttagaaaaggaggtcaaaaaactttcttacgaggtagaa
aaaaaagaacaagaggtccggtcaatccaagaaaaaattaaaaaactaaaagctcattta
gaggaaatatatgaaaaaagaaaccttttacttaaaattcaaagtcttcttaaagatgaa
gaacgattaagagatttagcccaaaagtttaaccatctaaaaacaattttagagaaaaaa
ccagaaatagaagaaaaaatcgcatctatttctcaagaaatacatcggttagagcgggag
aaaagagaccttgagattaaaaacttagctttagcggtatcccaatttctggaaaaggat
aagccttgtcctgtatgtggttccacccatcatcctgcccctatcaaagatgaaaatttt
actgaaaggttaaaaaaaattgagttggcattaaaaaataaaaatgctgagttagaaaag
actaaaacctattttgataagcttgaaggaaaacttgaacaccttaaaaaagaacttctc
ccttataaagataaagaagaagaaatactccaaaaattaaccgaaatagacactcaaaaa
agtagacatttagaccttatttctttgtatcaaaaccatccttcttctatccaagagctt
gaatctctatcccaaaccttaaaagaaacccttaaccaaaacgaagaaaaggaaaaagaa
ctttctggtgagttagaaagtaaaaaacagaaactgttaggtttaaaaggacgtcttgag
ggtttgttaaatgatttaaaaggtcaagtagacacgttagaggctttaaaggctaagatc
gatcatgaagaaaaaataatcgctaagtttgaaaatcaaaaaaaacaagtagaacaagac
ctaaaaaactatagcatcgagaaaaccgccgtagcacaagacctaaaaaaccaaaaagag
ttcttacaacatttgctaaaaaactacaaggaccaaatacttaaaattttgcctttaaaa
aggcaaaaccttataaaacaactttatgagttcgaaacccttaaaaccgaaatagctaaa
atccaaaatttagaagcagaaataaatgagttttatcaaaaaaaagaaaaacttaaagca
gagaaagaagaaatagaaagagagctaaaaattctaagccaagaaaccttagaagaatta
gaaaaaaaaatagctcaagctttagaggctttaaaccaaaaaaagaaaaacgtagaggac
ctttttaccaaggtcaatcaagaaatagggatggagattaacgaaatagaaaagtttgaa
accattctaagctcctatcaaggcttagaaaaaaacctaaaaaaaaccgagcaagaatgt
agggttttaggcaaactggttgaccttatctcagggaaaaaccttaaaggaatttctttt
cattcctttgtagtttctatgttcgcaaagctaatttttcagagggctaacacttattta
tgggagttttcctttgggcgttataaatttttagaagagatctttctacaaaaaagagga
tcaattgagatttttgactactttaccggagataaaagagaggttaaaaccctatcagga
ggagaatcttttatcgctacccttgcccttgcccttgggacttctgacgtcatcacctat
ctttttaaagccaaaccttttgaatccctttttatagacgagggatttgggagtttagac
gaaaatactttaaataaagtgatagaaattttactaaatctttctgagaaaagcggaagg
attatcgggatcatttctcatcttaaggagatgaaggaatcttttcctttggtattagag
gtattaaaagaccctgtctccggcagtaaaatcaatctaataagaaaacttccctcatga
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