Thermodesulfobacterium sp. TA1: F1847_01560
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Entry
F1847_01560 CDS
T06202
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F1847_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thet03021
]
F1847_01560
03400 DNA repair and recombination proteins [BR:
thet03400
]
F1847_01560
Enzymes [BR:
thet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F1847_01560
Transcription machinery [BR:
thet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F1847_01560
DNA repair and recombination proteins [BR:
thet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F1847_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QER41488
UniProt:
A0A5P1UZ61
LinkDB
All DBs
Position
288677..289642
Genome browser
AA seq
321 aa
AA seq
DB search
MKKEIELIKPEEIRVHKDSQFPYYGKFIIEPLERGYGITLGNALRRVLLSSIPGYSITEV
KLEGAPHEFTSLPGVVEDVTEIILNLKTVRFKLKEDGPFYFRIEKVGEGEVKAGDIQVGD
KGEIVNPEAHIATLTKDGKLFMEIKVEKGRGYAPAEYNKNNEIGVILVDGLFSPITKVNF
NVTQARVGKSSDYDSLVLEIYTDGTIDPKEALIRSAKILVEQFMVFLGEEKIGLEPAPVE
AITTQNVLNLPIEELDLSGRAYNCLKAANINYVGQLVQKTESELLKLRSFGKKSLDEIVE
KLNRFNLKLGMTDVKWKSPKD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggaaatagagcttattaagcctgaagaaattagagtacataaggatagtcag
tttccttattatggaaagtttatcatcgagcccttagaaaggggatatggcattaccttg
ggtaatgcgttaagaagagttcttctttcttctatacctggttattctatcactgaggtt
aagctagagggtgctccccatgagtttactagtttacctggagtagttgaggatgtgaca
gaaatcattcttaatctaaaaacagtaaggtttaagctaaaagaagatggtcctttctat
tttaggatagaaaaggttggagagggagaggttaaggctggagatattcaggttggagat
aaaggggaaatagtaaatcctgaggctcatatagctactttaaccaaagatggaaagttg
tttatggaaatcaaggtggaaaaaggtagaggttatgcgcctgctgagtataataaaaat
aatgaaataggtgttattttggttgatggtcttttttctcctattactaaagttaatttt
aatgtaactcaggcacgtgttggtaaaagtagtgattacgatagtttagtgttagagata
tatactgatggcacgatagaccctaaagaagctttgataaggtctgctaagattttagta
gagcagtttatggtctttttgggtgaggaaaagataggtttagagcctgctcctgtagag
gctattactacccaaaatgtgcttaatctgcctatagaggaacttgacctttctggtagg
gcatataattgtcttaaagcagctaacataaactatgtaggacagttggtacaaaaaaca
gagtctgagcttttaaaacttagaagttttggtaaaaaatctttagacgaaatagtagaa
aagcttaataggtttaacctaaaacttgggatgacagatgttaaatggaaatctccaaaa
gattag
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