Thermodesulfobacterium sp. TA1: F1847_01620
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Entry
F1847_01620 CDS
T06202
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
thet
Thermodesulfobacterium sp. TA1
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thet03016
]
F1847_01620
Enzymes [BR:
thet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F1847_01620
Transfer RNA biogenesis [BR:
thet03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F1847_01620
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
QER41499
UniProt:
A0A5P1UX24
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Position
complement(302141..304129)
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AA seq
662 aa
AA seq
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MDLNLLKNRIVDLFYREKITTVYVKDIKGKRLHVVLSSGKEELINHQALISFEEKPVSFK
DLNQILQFLKEKNANREKLKDKFNLKDLWEVVVEEGEVFSAKELVELFLGTLPNEDEIAG
FLRKVCEEKLYFKLKEPNLVEITSREEVEKELHRREKELEKIKKINQGVEVLKALKSGHT
ERFEKDIVDFWISSLKDYFLWEDQSSSNKLIKEVLEKAEITDQTQIFDLLVKLNQFDEDE
NVDLLKTKFPLEFTPEELNQAENICLSPLDDLPREDLTHLETFTIDAEDTEDFDDALSFE
EKEDGCLIYVHIAEVAEFINPGTPLWNAALERALTLYLPEKIIPMLPFSLSHERFSLKQG
EIRPAMTFKIYLGKEGELKDFQVVLSLIKVKKRLTYNEVDSYLISGDPFWQRLYQIFMNF
KRQREERGALAIFLPEVEVKVAKDGTISVFKIEMTPARLLVAEAMVLTNYLGAKFLHQNQ
LPAIFRSQPKPSEIIENPEESLYLKLLQLRYLAKSELSLYPEYHSGLGLEAYATLSSPIR
RFVDLINQHQLKAFLTGGNPLSEKDLKELLPELQTNLQRAMFLQNKREKYFLLKYLQTQA
KEQPLPGLVLQVQNKRAKVYLIDFNLTGELVGCKENLTPGQEITVKIEKVNPRLESLRLK
LV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaccttaaccttcttaaaaaccgaatagttgatctcttttatcgagaaaaaataacc
accgtctatgtaaaagacataaaaggaaaacgcctgcacgtagttttatcctcaggaaaa
gaggaacttataaaccaccaagccttgatatcctttgaagaaaaacctgtttcttttaaa
gacttaaaccaaatattacaatttctcaaagaaaaaaacgcaaacagagaaaaactaaaa
gacaaatttaaccttaaagacctatgggaagtagtggttgaagaaggagaggtcttttca
gccaaagagttggtagaactattcttaggaactttgccaaatgaggacgagatagcaggt
tttttaaggaaggtttgtgaggaaaaactttactttaaactaaaggaaccaaacttagtt
gagataacctctcgggaagaggtagaaaaggaacttcacagaagagaaaaggagcttgaa
aaaataaaaaaaataaaccaaggagtagaagttttaaaggccttaaaatcagggcacaca
gaaaggtttgaaaaggacatcgtagacttctggatatctagtctaaaagactacttttta
tgggaagatcaaagttcttctaataagctgataaaagaagtattagaaaaggcagaaatt
acagaccaaacccaaatttttgaccttttggttaaactaaaccagtttgatgaggacgaa
aacgtagacctcttaaaaactaaatttcctttagagtttacaccagaagaattaaatcaa
gcagaaaacatctgtttgtcacctttagatgatttaccaagagaagatttaacccattta
gagacctttacgatagacgcagaagatacagaagattttgacgatgctttaagttttgaa
gaaaaagaagacggatgtttaatctatgtgcatatcgcagaggttgctgagtttattaac
cctggtactcctctctggaacgctgctttagaaagggctttaactctttatcttccagaa
aaaatcattcctatgcttcctttttctctctcccatgagcggtttagcttaaaacaagga
gagattcgacctgctatgacctttaaaatttacttggggaaagagggtgagctgaaagac
tttcaagtagtactttctcttataaaagtaaaaaaaagactcacctataacgaggtagac
tcttatttaatctcaggagaccctttctggcaaagactttatcaaatttttatgaatttc
aaaagacaaagagaagaaagaggtgccttggctatctttttgcctgaggttgaagttaaa
gtagcaaaagacgggacgatttctgtgtttaaaatagagatgacccctgccagactgttg
gtggctgaagcgatggttcttaccaactatttaggggccaaatttttacaccaaaaccaa
cttcctgccatctttcgttctcagcctaaaccttcagagataatagaaaaccctgaagaa
agtctctatcttaaactccttcagctaagatatttggctaaatcagagctttctctttat
ccagagtaccactctggattagggcttgaggcctacgccactttgagttctcctataaga
cgttttgttgacttaataaaccagcatcagttaaaggcctttcttaccggaggaaaccct
ctttccgaaaaagatcttaaggaactcttaccagagctacaaaccaatctccaaagagct
atgtttcttcaaaacaaaagagaaaaatactttcttcttaaatacctgcaaactcaagcc
aaggaacaacctttaccaggcttggttttgcaggttcaaaataaacgagctaaggtctat
ttaatcgattttaaccttacaggagaattagtaggttgcaaagaaaaccttacccctgga
caagaaatcaccgttaagatagagaaggtaaaccccagattagaaagtttaagattaaaa
cttgtttag
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