Thermodesulfobacterium sp. TA1: F1847_04480
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Entry
F1847_04480 CDS
T06202
Name
(GenBank) DUF3553 domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet03420
Nucleotide excision repair
thet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1847_04480
03430 Mismatch repair
F1847_04480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thet03400
]
F1847_04480
Enzymes [BR:
thet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1847_04480
DNA repair and recombination proteins [BR:
thet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1847_04480
MMR (mismatch excision repair)
Other MMR factors
F1847_04480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DUF3553
CarD_TRCF_RID
PcrA_UvrD_tudor
HHH_5
DEAD
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QER42038
UniProt:
A0A5P1V0U3
LinkDB
All DBs
Position
complement(868583..870739)
Genome browser
AA seq
718 aa
AA seq
DB search
MFTVSQLEFLKELNPAQLEAVQTIFGPLLVIAGAGSGKTRTLTSRMAYLVAQGVPPEKIL
LLTFTKRASKEMIQRAGALLKTDCDKIIGGTFHSISQYMLRFYGYLLGYQSNFTILDRSD
SEDLIHLLRNSLGFADAKKKFPKKETLATIYSKMVNQQRTLEDLLKTYYPQFLDFYYEIE
RLLIEYQNYKKEHHLMDYDDLLVNWLSILKTYPQIREEIGKRFEFIMVDEYQDTNTLQGE
IIRYMAERHQNVMVVGDDSQSIYGFRGANYKNIFDFPKLFPNTKIIKLEQNYRSTQPILD
LANHIIAKSKIKYTKNLFTLRKDGKKPVLFYAEDETESSKFVAEKVLELREKGIKLSQIA
VLFRSASHSFDLEMELTKRGIPFIKYGGLKLLEAAHIKDFLSILRILSNPKDFLSWNRVL
LLLEGIGPRTAEKIIETLKQANNDFFFSLERLTYRFSFLEFKALISLITEVVKFKEKPSN
CLLRVWDFYQPIFQRVYYEDYHRRERDIEALLDLSEKYETLEEFLTDLMLEPIEIYEKKP
AELDDHLVLSTVHSAKGLEWHTVFILSLIDGRFPSVYSLENEEELEEERRLFYVAVTRAR
EELFLISPMTTYVRGEGKTLAKVSKFIKDLDLNLFQVYHKKEEKKLSLKDSKNGGQDIKP
SFTKNLFRFKIGDLVKHPHFGIGEVMEVVGEEKVRINFPQKGPTLLNLKYTKLEKIIN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtaagtcagttagagtttttaaaagagttaaatcctgctcagcttgaggcg
gtccaaacgatttttgggcctcttttggtgatagcaggggcaggttcaggtaaaacgaga
acccttacctcaaggatggcctatttagtagcccaaggggttccacctgaaaagatatta
cttttaacctttactaaaagggcttcaaaagagatgatacaaagagcaggagctctttta
aaaactgattgtgataaaatcataggaggaaccttccattctatctcacaatatatgctt
aggttttatggatatcttttaggttatcagtctaactttactatccttgatagaagcgat
tctgaagacttgatacatcttttaagaaatagtttagggtttgccgatgccaaaaaaaag
tttcctaaaaaagaaaccttggctaccatttacagcaagatggttaaccaacaaaggact
cttgaagaccttttgaaaacctattatcctcagtttttagatttttattatgagatagaa
aggcttttgatagagtatcaaaactacaagaaagaacatcatctaatggattatgatgac
cttttagtcaattggcttagcattttaaaaacttatccccaaataagagaagaaatcgga
aaacgttttgagtttatcatggtagacgaatatcaagataccaatacccttcaaggtgaa
atcatcagatatatggctgaaaggcatcaaaatgtaatggttgtgggagatgattctcaa
agcatttatggattcagaggggctaattataaaaacatttttgattttcctaagcttttt
ccaaatactaaaataatcaaacttgagcaaaattaccgtagcacccaacctattttagac
ttagccaaccatataattgctaaatctaaaataaaatacaccaaaaacttgtttaccttg
cgaaaggacggaaaaaaacctgttttgttttatgctgaagacgagacagagtcaagcaag
tttgtagcagaaaaggttttagaactccgagaaaagggaataaaactctctcagatagcg
gtgctgtttaggtctgcctctcattcgtttgatttagaaatggaacttaccaaaagaggt
ataccttttatcaaatatgggggattaaaacttttagaagcggcccatataaaagatttt
ctttctattttaaggatacttagcaatcctaaagactttttgtcttggaacagggttctt
ttactgcttgaaggtataggtccaagaacagcagaaaagataatagaaactctaaaacaa
gctaataatgactttttcttttctttagaaagacttacctataggttttcttttttagag
tttaaagctcttatttctttaataaccgaggtagttaagtttaaagaaaaaccctctaat
tgtcttctaagagtctgggacttttatcaacctatttttcaaagagtatattacgaagat
tatcaccgaagagaaagagacatagaggcccttttagacctttcagaaaaatatgagacc
ttggaagagtttttgacagacctaatgttagaacccatagagatctatgaaaagaagcct
gctgaacttgacgaccatttagtcctatcaaccgtacattcagcaaaaggattagaatgg
cataccgtttttattttatctcttatagatggtaggtttccctcggtttacagtttagaa
aatgaagaagagttagaagaggaaagaaggctcttttatgtagcggtgacccgtgcaaga
gaagaacttttccttatctctcctatgactacctatgtaagaggagaaggaaaaaccctt
gccaaggtttctaagtttataaaagatttagaccttaatttatttcaagtttaccataaa
aaagaagaaaaaaaactctccttaaaggattctaaaaacggtggtcaagacattaaaccc
agctttacaaaaaatcttttccgttttaaaataggagatttagtaaaacaccctcatttt
gggataggagaggtgatggaagtagttggtgaagaaaaagttaggataaacttccctcaa
aaaggacctacccttcttaatctaaaatatactaaattagaaaaaattattaattaa
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