Thermodesulfobacterium sp. TA1: F1847_04525
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Entry
F1847_04525 CDS
T06202
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thet
Thermodesulfobacterium sp. TA1
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thet03016
]
F1847_04525 (truB)
Enzymes [BR:
thet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F1847_04525 (truB)
Transfer RNA biogenesis [BR:
thet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F1847_04525 (truB)
Prokaryotic type
F1847_04525 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QER42046
UniProt:
A0A5P1V3Z0
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All DBs
Position
complement(879493..880443)
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AA seq
316 aa
AA seq
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MRKDNQLNGILVVDKPEGLTSTQTLEKVKKILKIKKAGHGGTLDPIATGVLPILLGKATK
VAQIFLEGDKVYQGEMQLGISTLTFDITGEVVAQKPIPDFSLEDLKKGAQTFLGEIDQIP
PPFSAAKFRGKPLYKYARDGLLIPKEPKKVKVFRFEILDITLPYVKFEIHCSKGTYIRSI
VNSFGERLECGATLTKLRRLKKSIFTIEEALTLEEISRLVQEDYEGLVKRIIPVEKSLEF
LPKILVSEDFSQRIQEGRPMHTSSFLSFIKFQKLTLSPYHEWIRILNPKGKLVAIIENPL
KNLSNEYIKYFRVFKD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagataatcagctaaacggaatacttgtggttgacaagcctgaaggtttaacc
tctactcaaaccttagaaaaagtaaaaaaaatattaaaaattaaaaaagctggccatgga
gggacccttgatcctatagctactggagttttacccatattacttggaaaagctactaaa
gtagcccaaatatttttagaaggggataaggtttatcaaggggagatgcaattaggaatt
agtacccttacctttgatattaccggagaggtagtcgcacaaaaacccatcccagatttt
tccttagaagatttaaaaaaaggtgctcaaacctttttaggagagatagaccagattcct
ccacccttttctgctgccaaatttagaggaaaacctctttataaatacgcaagggatgga
cttctaataccaaaggaacctaaaaaggttaaggtctttcggtttgaaattttagacata
acccttccttacgtgaagtttgaaatacattgttctaaaggtacttatattaggtctata
gtaaatagttttggggagaggttggagtgtggtgctacactaactaaacttagaaggtta
aaaaaaagtatttttaccatagaagaagccttaaccttagaagaaatctctcggttggtt
caggaagattacgagggtttggtaaaaagaataattcctgtagaaaaatctcttgaattt
ttacctaaaatattagtgagtgaagatttttctcaacggatacaagagggtagacctatg
catacttcttcttttctttctttcatcaaatttcagaaacttaccctatccccctatcat
gaatggataaggattttaaacccaaaaggcaagttagtagccattatcgaaaacccatta
aaaaacctctctaatgaatacataaaatatttcagagtttttaaagactaa
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